RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 ZWILCHQ9H900 591 aa17.77■□□□□ 0.43
CTDP1-207ENST00000591598 NINJ2Q9NZG7 142 aa17.77■□□□□ 0.43
CTDP1-207ENST00000591598 RPS12P25398 132 aaKnown RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 IVDP26440 423 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 GTF2A1P52655 376 aaPredicted RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 NFX1Q12986 1120 aaKnown RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 ANKRD20A8PQ5CZ79 823 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 GPAT2Q6NUI2 795 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 TRMT10CQ7L0Y3 403 aaKnown RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 ZNF317Q96PQ6 595 aaPredicted RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 TRAIPQ9BWF2 469 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 MAFBQ9Y5Q3 323 aaPredicted RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 COL11A1P12107 1806 aaPredicted RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 PSME4Q14997 1843 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 PIK3R2O00459 728 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 FSBPO95073 299 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 CNGA2Q16280 664 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 SPDYCQ5MJ68 293 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 ICE2Q659A1 982 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 RBM15Q96T37 977 aaKnown RBP eCLIP17.76■□□□□ 0.433e-8■■■■■ 27.6
CTDP1-207ENST00000591598 CGRRF1Q99675 332 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 VPS33BQ9H267 617 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 SAYSD1Q9NPB0 183 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 TJP2Q9UDY2 1190 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 AFG3L2Q9Y4W6 797 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 NFASCO94856 1347 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 C19orf81C9J6K1 198 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 NOP56O00567 594 aaKnown RBP17.76■□□□□ 0.43
CTDP1-207ENST00000591598 CETPP11597 493 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 RTP1P59025 263 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 ZNF677Q86XU0 584 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 PCYT2Q99447 389 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 CD248Q9HCU0 757 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 SLC40A1Q9NP59 571 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 HOMER3Q9NSC5 361 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 NRBP2Q9NSY0 501 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 PARVAQ9NVD7 372 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 BTBD7Q9P203 1132 aa17.76■□□□□ 0.43
CTDP1-207ENST00000591598 SPAG7O75391 227 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 CETN2P41208 172 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 SCTRP47872 440 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
CTDP1-207ENST00000591598 GPS1Q13098 491 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 PTK6Q13882 451 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 CISHQ9NSE2 258 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 BANF1O75531 89 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 ARL2P36404 184 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 ARSEP51690 589 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 CCDC89Q8N998 374 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 MAIP1Q8WWC4 291 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 TMEM121Q9BTD3 319 aa17.75■□□□□ 0.43
CTDP1-207ENST00000591598 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 LDHAP00338 332 aaKnown RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 TMEM191BP0C7N4 346 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 CDH8P55286 799 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 FASTKD3Q14CZ7 662 aaKnown RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 HSDL1Q3SXM5 330 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 YTHDF3Q7Z739 585 aaKnown RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 GPATCH11Q8N954 259 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 SYNCQ9H7C4 482 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 AGTPBP1Q9UPW5 1226 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 SGK1O00141 431 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 B4GALT5O43286 388 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 ADCY3O60266 1144 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 FARP2O94887 1054 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 OAZ1P54368 228 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 TGFB2P61812 414 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 OGDHQ02218 1023 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 TMEM63BQ5T3F8 832 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 FAM47EQ6ZV65 393 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 CNPY4Q8N129 248 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 EMC1Q8N766 993 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 VPS37BQ9H9H4 285 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 POLIQ9UNA4 740 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 SCINQ9Y6U3 715 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 TBXAS1P24557 533 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 MPP2Q14168 576 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 TFAP2BQ92481 460 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 ABCF3Q9NUQ8 709 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 RGS17Q9UGC6 210 aaPredicted RBP17.74■□□□□ 0.43
CTDP1-207ENST00000591598 PCSK1NQ9UHG2 260 aa17.74■□□□□ 0.43
CTDP1-207ENST00000591598 STX2P32856 288 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 LACTBP83111 547 aaPredicted RBP17.73■□□□□ 0.43
CTDP1-207ENST00000591598 KLF1Q13351 362 aaPredicted RBP17.73■□□□□ 0.43
CTDP1-207ENST00000591598 VGLL4Q14135 290 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 ZNF699Q32M78 642 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 RHBDF2Q6PJF5 856 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 ERICH1Q86X53 443 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 CEP57Q86XR8 500 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 COPS5Q92905 334 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 NAALADL1Q9UQQ1 740 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 PSTPIP1O43586 416 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 CCNG2Q16589 344 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 PLEKHA7Q6IQ23 1121 aa17.73■□□□□ 0.43
CTDP1-207ENST00000591598 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
CTDP1-207ENST00000591598 ANKMY2Q8IV38 441 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms