RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 PCDHB2Q9Y5E7 798 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PARP4Q9UKK3 1724 aaKnown RBP12.04□□□□□ -0.48
SEH1L-208ENST00000590843 MAN2B1O00754 1011 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 OPA1O60313 960 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 RHOCP08134 193 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ACRP10323 421 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PDE1BQ01064 536 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ZNF438Q7Z4V0 828 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PPP1R13BQ96KQ4 1090 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 VPS28Q9UK41 221 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 SGK1O00141 431 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 P4HA2O15460 535 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ACOT2P49753 483 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ZPBP2Q6X784 338 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 C11orf74Q86VG3 221 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PHF20Q9BVI0 1012 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
SEH1L-208ENST00000590843 FAM47E-STBD1D6RA91 191 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 MYBP10242 640 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ALADP13716 330 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ADCY8P40145 1251 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 HALP42357 657 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 TRIM60Q495X7 471 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 MTHFD1LQ6UB35 978 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PKNOX2Q96KN3 472 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
SEH1L-208ENST00000590843 MSH4O15457 936 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 SRGAP2O75044 1071 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ITGB3P05106 788 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 TM4SF4P48230 202 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PRAMEP78395 509 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 MESDQ14696 234 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
SEH1L-208ENST00000590843 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 SLC20A1Q8WUM9 679 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 SMARCD1Q96GM5 515 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 PCDHA7Q9UN72 937 aa12.04□□□□□ -0.48
SEH1L-208ENST00000590843 ITIH6Q6UXX5 1313 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 BCAT1P54687 386 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 GLRA4Q5JXX5 417 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 ARFGAP2Q8N6H7 521 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 ATF2P15336 505 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 TWF1Q12792 350 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 SNRNP35Q16560 246 aaKnown RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 RIOX1Q9H6W3 641 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 FAM114A2Q9NRY5 505 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 ADGRA2Q96PE1 1338 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 DFFAO00273 331 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 MYO1DO94832 1006 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 TJP3O95049 919 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 ERVK-10P10266 1014 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 SKILP12757 684 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 POLR2LP62875 67 aaKnown RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 RABEPKQ7Z6M1 372 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 ALKBH8Q96BT7 664 aaKnown RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 CCSER1Q9C0I3 900 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 EPB41L4AQ9HCS5 686 aaPredicted RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 RTN4Q9NQC3 1192 aaKnown RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 SNX2O60749 519 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 SETSIPP0DME0 302 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 BRAFP15056 766 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 CYP2C18P33260 490 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 HECTD3Q5T447 861 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 SPPL2BQ8TCT7 592 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 PABPC5Q96DU9 382 aaKnown RBP12.03□□□□□ -0.48
SEH1L-208ENST00000590843 SUN2Q9UH99 717 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 DNAJC12Q9UKB3 198 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 TBX20Q9UMR3 447 aa12.03□□□□□ -0.48
SEH1L-208ENST00000590843 GADD45BO75293 160 aaPredicted RBP12.02□□□□□ -0.48
SEH1L-208ENST00000590843 SLC2A4P14672 509 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 FXR2P51116 673 aaKnown RBP eCLIP12.02□□□□□ -0.48
SEH1L-208ENST00000590843 NPEPPSP55786 919 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 NUGGCQ68CJ6 796 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 SERPINA13PQ6UXR4 307 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 CCDC170Q8IYT3 715 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 DHX35Q9H5Z1 703 aaKnown RBP12.02□□□□□ -0.48
SEH1L-208ENST00000590843 IMPACTQ9P2X3 320 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 DNPEPQ9ULA0 475 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 CLIC4Q9Y696 253 aa12.02□□□□□ -0.48
SEH1L-208ENST00000590843 NCAM1P13591 858 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 BCAR1P56945 870 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 RCN2Q14257 317 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TSGA10IPQ3SY00 556 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 C6orf118Q5T5N4 469 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ZSCAN1Q8NBB4 408 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TSTD1Q8NFU3 115 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 MKNK1Q9BUB5 465 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms