RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 VRTNQ9H8Y1 702 aa20.17■□□□□ 0.82
MBD1-223ENST00000590215 METTL14Q9HCE5 456 aaKnown RBP20.17■□□□□ 0.82
MBD1-223ENST00000590215 FBXL5Q9UKA1 691 aa20.17■□□□□ 0.82
MBD1-223ENST00000590215 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
MBD1-223ENST00000590215 TIMM13Q9Y5L4 95 aaPredicted RBP20.17■□□□□ 0.82
MBD1-223ENST00000590215 VNN1O95497 513 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 GLUD1P00367 558 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 TRIM49P0CI25 452 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 TRIM49CP0CI26 452 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 SRGAP2BP0DMP2 458 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 EPCAMP16422 314 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 HOXB8P17481 243 aaPredicted RBP20.16■□□□□ 0.82
MBD1-223ENST00000590215 KCNA5P22460 613 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 ATICP31939 592 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 OR1D2P34982 312 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 CTXN3Q4LDR2 81 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 OVOS1Q6IE37 1185 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 ANKRD54Q6NXT1 300 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 LLGL2Q6P1M3 1020 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 SPATA18Q8TC71 538 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 ATXN2LQ8WWM7 1075 aaKnown RBP20.16■□□□□ 0.82
MBD1-223ENST00000590215 DZANK1Q9NVP4 752 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 ARMCX3Q9UH62 379 aaPredicted RBP20.16■□□□□ 0.82
MBD1-223ENST00000590215 DACH1Q9UI36 760 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 BARX2Q9UMQ3 279 aaPredicted RBP20.16■□□□□ 0.82
MBD1-223ENST00000590215 CDY1Q9Y6F8 540 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 XIRP2A4UGR9 3374 aa20.16■□□□□ 0.82
MBD1-223ENST00000590215 TGM5O43548 720 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 PAPLNO95428 1278 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 FGFR1OPO95684 399 aaKnown RBP20.15■□□□□ 0.82
MBD1-223ENST00000590215 GNA14O95837 355 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 MARSP56192 900 aaKnown RBP20.15■□□□□ 0.82
MBD1-223ENST00000590215 BIRC3Q13489 604 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 TRPC3Q13507 836 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 NCOA4Q13772 614 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 WSCD1Q658N2 575 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 DPH6Q7L8W6 267 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 TOP6BLQ8N6T0 577 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 SRRTQ9BXP5 876 aaKnown RBP20.15■□□□□ 0.82
MBD1-223ENST00000590215 PLEKHA4Q9H4M7 779 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 TMEM8AQ9HCN3 771 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 DPP7Q9UHL4 492 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 L1RE1Q9UN81 338 aa20.15■□□□□ 0.82
MBD1-223ENST00000590215 OR6C75A6NL08 312 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 STX10O60499 249 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 PHACTR2O75167 634 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 ABLIM3O94929 683 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 GCLMP48507 274 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 MYL6P60660 151 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 TFF2Q03403 129 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 AAK1Q2M2I8 961 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 SOWAHAQ2M3V2 549 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 SYCE2Q6PIF2 218 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 PALB2Q86YC2 1186 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 TMEM86AQ8N2M4 240 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 PDCL2Q8N4E4 241 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 SMRP1Q8NCR6 262 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 ZNF461Q8TAF7 563 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 SLC35C1Q96A29 364 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.81
MBD1-223ENST00000590215 RTP3Q9BQQ7 232 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 S1PR5Q9H228 398 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 FBXW11Q9UKB1 542 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 SNX9Q9Y5X1 595 aa20.14■□□□□ 0.81
MBD1-223ENST00000590215 H3BQ06 376 aaPredicted RBP20.13■□□□□ 0.81
MBD1-223ENST00000590215 HUS1O60921 280 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 MRPS5P82675 430 aaKnown RBP20.13■□□□□ 0.81
MBD1-223ENST00000590215 ROR1Q01973 937 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 TPGS2Q68CL5 300 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 KRT39Q6A163 491 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 EP400NLQ6ZTU2 488 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 RTL10Q7L3V2 364 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 METTL23Q86XA0 190 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 GLYCTKQ8IVS8 523 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.13■□□□□ 0.81
MBD1-223ENST00000590215 TAF4BQ92750 862 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 CD207Q9UJ71 328 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 MAFFQ9ULX9 164 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 TSC2P49815 1807 aa20.13■□□□□ 0.81
MBD1-223ENST00000590215 PLXNA3P51805 1871 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 WDR27A2RRH5 827 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 GABRDO14764 452 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 PMM2O15305 246 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 ASS1P00966 412 aaKnown RBP20.12■□□□□ 0.81
MBD1-223ENST00000590215 HLA-DRAP01903 254 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 SGSM1Q2NKQ1 1148 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 PUS10Q3MIT2 529 aaKnown RBP20.12■□□□□ 0.81
MBD1-223ENST00000590215 WDR72Q3MJ13 1102 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 CAVIN1Q6NZI2 390 aaKnown RBP20.12■□□□□ 0.81
MBD1-223ENST00000590215 SASS6Q6UVJ0 657 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 IRF2BP1Q8IU81 584 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 TRIM59Q8IWR1 403 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.12■□□□□ 0.81
MBD1-223ENST00000590215 KREMEN2Q8NCW0 462 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 CMASQ8NFW8 434 aaPredicted RBP20.12■□□□□ 0.81
MBD1-223ENST00000590215 MAN1C1Q9NR34 630 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 ANO10Q9NW15 660 aa20.12■□□□□ 0.81
MBD1-223ENST00000590215 MTCL1Q9Y4B5 1905 aaKnown RBP20.12■□□□□ 0.81
MBD1-223ENST00000590215 TACC1O75410 805 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms