RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 GATA6Q92908 595 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 ACO2Q99798 780 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 ADAM33Q9BZ11 813 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 DUSP15Q9H1R2 295 aaPredicted RBP13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 TNFSF13BQ9Y275 285 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 LOC400499M0QZD8 3231 aa13.98□□□□□ -0.17
PRKCSH-210ENST00000589990 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 BTBD18B2RXH4 712 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ABLIM1O14639 778 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 KCNE1P15382 129 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 KRT2P35908 639 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 YARSP54577 528 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 CYP4F8P98187 520 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 RING1Q06587 406 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 SPAG1Q07617 926 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ZNF568Q3ZCX4 644 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ARHGAP29Q52LW3 1261 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 GPR158Q5T848 1215 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 SH3PXD2AQ5TCZ1 1133 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 C1orf228Q6PIY5 440 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ATAD1Q8NBU5 361 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 E2F7Q96AV8 911 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ZBTB45Q96K62 511 aaPredicted RBP13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ZC3H10Q96K80 434 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 TMEM209Q96SK2 561 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 CCDC94Q9BW85 323 aaPredicted RBP13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 TARS2Q9BW92 718 aaKnown RBP13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 GPR88Q9GZN0 384 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 VPS45Q9NRW7 570 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 INVSQ9Y283 1065 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 PCDHGA5Q9Y5G8 931 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 ABCA7Q8IZY2 2146 aa13.97□□□□□ -0.17
PRKCSH-210ENST00000589990 SMG1Q96Q15 3661 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 ARHGEF35A5YM69 484 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 EGFP01133 1207 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 GABRR2P28476 465 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 CREB5Q02930 508 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 KIAA1211LQ6NV74 962 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 SYNPOQ8N3V7 929 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 RIN3Q8TB24 985 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 NACC1Q96RE7 527 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 SCNM1Q9BWG6 230 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 ATXN3LQ9H3M9 355 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 TUFT1Q9NNX1 390 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 HPS4Q9NQG7 708 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 TOPORSQ9NS56 1045 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 SLC38A7Q9NVC3 462 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 CNTN3Q9P232 1028 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 ORC3Q9UBD5 711 aaPredicted RBP13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 TPCN1Q9ULQ1 816 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 PCDHB8Q9UN66 801 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 IGSF10Q6WRI0 2623 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 NUP205Q92621 2012 aa13.96□□□□□ -0.17
PRKCSH-210ENST00000589990 MYO16Q9Y6X6 1858 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 CACNA1EQ15878 2313 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 PATE3B3GLJ2 98 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 K7ERI5 159 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 DPYSL4O14531 572 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 RNF40O75150 1001 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 RPL9P32969 192 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 EFNA5P52803 228 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 SLC10A6Q3KNW5 377 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 TMEM196Q5HYL7 178 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 CENPPQ6IPU0 288 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 DNAJB7Q7Z6W7 309 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 BPIFB1Q8TDL5 484 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 SLC8A2Q9UPR5 921 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 CCL26Q9Y258 94 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 ANK1P16157 1881 aa13.95□□□□□ -0.18
PRKCSH-210ENST00000589990 ASCC3Q8N3C0 2202 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 CCDC163A0A0D9SF12 145 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 MTMR11A4FU01 709 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 ANTXRLA6NF34 631 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 PPEF2O14830 753 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 CAVIN2O95810 425 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 ARSAP15289 507 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 XBP1P17861 261 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 PROZP22891 400 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 MCM7P33993 719 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 GUCY2FP51841 1108 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 EPHB3P54753 998 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 YWHAHQ04917 246 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 PPP2R5AQ15172 486 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 ITPRIPL2Q3MIP1 535 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 LRSAM1Q6UWE0 723 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 DAW1Q8N136 415 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 APPL2Q8NEU8 664 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 ZCCHC14Q8WYQ9 949 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
PRKCSH-210ENST00000589990 SLC46A2Q9BY10 475 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms