RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 ELF1P32519 619 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 RDXP35241 583 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 MRPL12P52815 198 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 LGALS4P56470 323 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 CAP1Q01518 475 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 RHDQ02161 417 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 ALDH6A1Q02252 535 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 ROM1Q03395 351 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 TRIM25Q14258 630 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 MYBPC2Q14324 1141 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 SNX17Q15036 470 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 SLFN12LQ6IEE8 588 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 PAQR3Q6TCH7 311 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 TMCO3Q6UWJ1 677 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 DPP8Q6V1X1 898 aaPredicted RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 USP45Q70EL2 814 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 KANSL1Q7Z3B3 1105 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 C11orf96Q7Z7L8 435 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 MORC1Q86VD1 984 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 PRR18Q8N4B5 295 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 ZBTB34Q8NCN2 500 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 NEK11Q8NG66 645 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 SNRNP27Q8WVK2 155 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 THUMPD2Q9BTF0 503 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 MMTAG2Q9BU76 263 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 UCKL1Q9NWZ5 548 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 CHCHD3Q9NX63 227 aaKnown RBP6.46□□□□□ -1.38
SMAD4-208ENST00000589706 STK17AQ9UEE5 414 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 STAP2Q9UGK3 403 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 DPP7Q9UHL4 492 aa6.46□□□□□ -1.38
SMAD4-208ENST00000589706 ABCC12Q96J65 1359 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 ZNF609O15014 1411 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 F8W031 263 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 TPP1O14773 563 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 PMM2O15305 246 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 CDKL5O76039 1030 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 GDF11O95390 407 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 ZBED1O96006 694 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 PFKMP08237 780 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 RPS12P25398 132 aaKnown RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 TRHRP34981 398 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 GDNFP39905 211 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 HTR3AP46098 478 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 GALK1P51570 392 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 MNAT1P51948 309 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 SLC16A1P53985 500 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 PDIA5Q14554 519 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 DHX8Q14562 1220 aaKnown RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 HLFQ16534 295 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 ANO4Q32M45 955 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 ZNF790Q6PG37 636 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 UNQ6494/PRO21346Q6UXR6 183 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 KIAA1328Q86T90 577 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 SPICE1Q8N0Z3 855 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 DRAXINQ8NBI3 349 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 RSAD2Q8WXG1 361 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 SMARCE1Q969G3 411 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 SHISA4Q96DD7 197 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 C1GALT1C1Q96EU7 318 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 MVB12AQ96EY5 273 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 ELAC2Q9BQ52 826 aaKnown RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 HTATIP2Q9BUP3 242 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 NYXQ9GZU5 481 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 RANBP17Q9H2T7 1088 aaKnown RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 FAM204AQ9H8W3 233 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 C19orf73Q9NVV2 129 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 ARHGAP28Q9P2N2 729 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 TAGLN3Q9UI15 199 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 DBR1Q9UK59 544 aaKnown RBP6.45□□□□□ -1.38
SMAD4-208ENST00000589706 USP16Q9Y5T5 823 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 MYPNQ86TC9 1320 aa6.45□□□□□ -1.38
SMAD4-208ENST00000589706 RIC1Q4ADV7 1423 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 NFIBO00712 420 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 DTNBO60941 627 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 COBLO75128 1261 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 NEBLO76041 1014 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 HRGP04196 525 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 PTGS1P23219 599 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 CHMLP26374 656 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 MC4RP32245 332 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 NF2P35240 595 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 RPS6KA3P51812 740 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 ZNF280AP59817 542 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-208ENST00000589706 CDK17Q00537 523 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SP3Q02447 781 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SLFN5Q08AF3 891 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SPIDRQ14159 915 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SLC9A5Q14940 896 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 OVCH2Q7RTZ1 564 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 VSIG10LQ86VR7 867 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SLC41A1Q8IVJ1 513 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 SP8Q8IXZ3 490 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 CAMKK1Q8N5S9 505 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 PPP1R35Q8TAP8 253 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 TSPEARQ8WU66 669 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 FMNL2Q96PY5 1086 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 ACE2Q9BYF1 805 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-208ENST00000589706 BATF3Q9NR55 127 aa6.44□□□□□ -1.38
SMAD4-208ENST00000589706 IRAK4Q9NWZ3 460 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms