RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 FAM193BQ96PV7 902 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 ARID3AQ99856 593 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 PDCL3Q9H2J4 239 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 MYO1AQ9UBC5 1043 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 BARX2Q9UMQ3 279 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 SNX9Q9Y5X1 595 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 CAPN15O75808 1086 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 GNA15P30679 374 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 LILRA4P59901 499 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 STILQ15468 1287 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 CCDC122Q5T0U0 273 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 DCLRE1AQ6PJP8 1040 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 UBE2Q1Q7Z7E8 422 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 SLC47A2Q86VL8 602 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 TMEM86AQ8N2M4 240 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 APPL2Q8NEU8 664 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 PPP1R13BQ96KQ4 1090 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 DESI2Q9BSY9 194 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 NAGPAQ9UK23 515 aa11.29□□□□□ -0.6
NEDD4L-224ENST00000588712 A0A087X0T9 212 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 PODXLO00592 558 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 POMCP01189 267 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 FAM228BP0C875 321 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 PNMA6AP0CW24 399 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 CD58P19256 250 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 ZNF132P52740 706 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 RNASELQ05823 741 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 SOX4Q06945 474 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 UPP1Q16831 310 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 DEFB128Q7Z7B8 93 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 LINC01599Q8WXQ3 324 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 TMEM176AQ96HP8 235 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 SYT11Q9BT88 431 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 CXCL16Q9H2A7 254 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 PRDM5Q9NQX1 630 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 NOCTQ9UK39 431 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 CEP83Q9Y592 693 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 PJA2O43164 708 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 TRAPPC3O43617 180 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 CILPO75339 1184 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 BAIAP3O94812 1187 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 KIF4AO95239 1232 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 EN2P19622 333 aaPredicted RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 NOP9Q86U38 636 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 GLYCTKQ8IVS8 523 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 RNF10Q8N5U6 811 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 ACRBPQ8NEB7 543 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 HTATIP2Q9BUP3 242 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 NT5C1AQ9BXI3 368 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 SNX25Q9H3E2 840 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 MIOSQ9NXC5 875 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 DSEQ9UL01 958 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 POLIQ9UNA4 740 aa11.28□□□□□ -0.6
NEDD4L-224ENST00000588712 CENPFP49454 3210 aa11.27□□□□□ -0.6
NEDD4L-224ENST00000588712 BTNL10A8MVZ5 291 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 DDX3XO00571 662 aaKnown RBP eCLIP11.27□□□□□ -0.612e-8■■□□□ 13.6
NEDD4L-224ENST00000588712 THAP12O43422 761 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 KIF5CO60282 957 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 RTN2O75298 545 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 LSM8O95777 96 aaKnown RBP11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 AMHP03971 560 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 H2AFZP0C0S5 128 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 VDRP11473 427 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 CLCNKBP51801 687 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 CYP27A1Q02318 531 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 IFI16Q16666 785 aaKnown RBP11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 H2AFVQ71UI9 128 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 LIMS2Q7Z4I7 341 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 ZNF606Q8WXB4 792 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 TNIP3Q96KP6 325 aa11.27□□□□□ -0.61
NEDD4L-224ENST00000588712 TRIM43BA6NCK2 446 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 CYB561D2O14569 222 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 B3GAT3O94766 335 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 IBSPP21815 317 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 GNL1P36915 607 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 LHX1P48742 406 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 DSC1Q08554 894 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 PPIGQ13427 754 aaKnown RBP eCLIP11.26□□□□□ -0.613e-8■■□□□ 12.2
NEDD4L-224ENST00000588712 SOWAHAQ2M3V2 549 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 DSTYKQ6XUX3 929 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 METTL23Q86XA0 190 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 DDX1Q92499 740 aaKnown RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 TRIM43Q96BQ3 446 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 SMYD3Q9H7B4 428 aa11.26□□□□□ -0.61
NEDD4L-224ENST00000588712 GOLGA2P5Q9HBQ8 144 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms