RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 MYO6Q9UM54 1294 aa24.22■■□□□ 1.47
ACTN4-210ENST00000588618 ARHGEF37A1IGU5 675 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 FOXN3O00409 490 aaPredicted RBP24.21■■□□□ 1.47
ACTN4-210ENST00000588618 NRP1O14786 923 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 TRAPPC3O43617 180 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 CAPN15O75808 1086 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 KIF4AO95239 1232 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 ACO1P21399 889 aaKnown RBP24.21■■□□□ 1.47
ACTN4-210ENST00000588618 STAT1P42224 750 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 RAP1GAPP47736 663 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 APPL2Q8NEU8 664 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 BCO2Q9BYV7 579 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 KCNF1Q9H3M0 494 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 SMYD3Q9H7B4 428 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 CYP3A43Q9HB55 503 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 KIAA1671Q9BY89 1806 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 TSC2P49815 1807 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 TMEM189-UBE2V1I3L0A0 370 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 ITGB1P05556 798 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 WEE2P0C1S8 567 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 KRT5P13647 590 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 CD58P19256 250 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 SLC11A1P49279 550 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 BCAR1P56945 870 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 HTRA4P83105 476 aaPredicted RBP24.21■■□□□ 1.47
ACTN4-210ENST00000588618 SHHQ15465 462 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 RASIP1Q5U651 963 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 TMEM139Q8IV31 216 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 FIBCD1Q8N539 461 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 TTC39CQ8N584 583 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 OR8K1Q8NGG5 319 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 AAASQ9NRG9 546 aa24.21■■□□□ 1.47
ACTN4-210ENST00000588618 CYB561D2O14569 222 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 GALTP07902 379 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 CCDC172P0C7W6 258 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 LAG3P18627 525 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 CDH8P55286 799 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 SFMBT2Q5VUG0 894 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 LRRC8AQ8IWT6 810 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 ZNF830Q96NB3 372 aaPredicted RBP24.2■■□□□ 1.46
ACTN4-210ENST00000588618 CWH43Q9H720 699 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 ADAM28Q9UKQ2 775 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 PCDHB4Q9Y5E5 795 aa24.2■■□□□ 1.46
ACTN4-210ENST00000588618 ODC1P11926 461 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 HNRNPH3P31942 346 aaKnown RBP24.19■■□□□ 1.46
ACTN4-210ENST00000588618 SOX5P35711 763 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 TOP6BLQ8N6T0 577 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 SENP8Q96LD8 212 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 ZNF558Q96NG5 402 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 PANX2Q96RD6 677 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 FAM124BQ9H5Z6 455 aaPredicted RBP24.19■■□□□ 1.46
ACTN4-210ENST00000588618 CISHQ9NSE2 258 aa24.19■■□□□ 1.46
ACTN4-210ENST00000588618 MRPL42Q9Y6G3 142 aaKnown RBP24.19■■□□□ 1.46
ACTN4-210ENST00000588618 ARID5AQ03989 594 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 TIGD5Q53EQ6 642 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 DPH6Q7L8W6 267 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 IRF2BP2Q7Z5L9 587 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 GDF15Q99988 308 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 NT5C1B-RDH14C9J2C7 533 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 NRDCO43847 1150 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 GFPT2O94808 682 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 FECHP22830 423 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 PBX3P40426 434 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 BRCC3P46736 316 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 AARSP49588 968 aaKnown RBP eCLIP24.18■■□□□ 1.46
ACTN4-210ENST00000588618 RGS19P49795 217 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 MEA1Q16626 185 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 HGSNATQ68CP4 663 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 TMEM270Q6UE05 265 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 KCNT2Q6UVM3 1135 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 METTL23Q86XA0 190 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 FAM71AQ8IYT1 594 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 DNAI2Q9GZS0 605 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 ACP6Q9NPH0 428 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 AIPL1Q9NZN9 384 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 DSEQ9UL01 958 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 NME7Q9Y5B8 376 aa24.18■■□□□ 1.46
ACTN4-210ENST00000588618 SF3B1O75533 1304 aaKnown RBP eCLIP24.18■■□□□ 1.461e-6■■■■■ 78.6
ACTN4-210ENST00000588618 VWA8A3KMH1 1905 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 I3L4J1 428 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 CCZ1BP86790 482 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 CCZ1P86791 482 aaPredicted RBP24.17■■□□□ 1.46
ACTN4-210ENST00000588618 ELAVL2Q12926 359 aaKnown RBP24.17■■□□□ 1.46
ACTN4-210ENST00000588618 ASIC2Q16515 512 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 SOWAHAQ2M3V2 549 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 LIMS2Q7Z4I7 341 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 ADGRF2Q8IZF7 708 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 SYN2Q92777 582 aaPredicted RBP24.17■■□□□ 1.46
ACTN4-210ENST00000588618 CHP1Q99653 195 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 PCDHB12Q9Y5F1 795 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 CHD7Q9P2D1 2997 aa24.17■■□□□ 1.46
ACTN4-210ENST00000588618 CALCAP01258 141 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 PLEKP08567 350 aaPredicted RBP24.16■■□□□ 1.46
ACTN4-210ENST00000588618 SKILP12757 684 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 FERP16591 822 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 CLCN1P35523 988 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 TMEM86AQ8N2M4 240 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 OR6B3Q8NGW1 331 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 SUSD3Q96L08 255 aa24.16■■□□□ 1.46
ACTN4-210ENST00000588618 MRPL45Q9BRJ2 306 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms