RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 C1orf131Q8NDD1 294 aaKnown RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 OTUD7AQ8TE49 926 aaPredicted RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 RILPL2Q969X0 211 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 EID2BQ96D98 161 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 MAELQ96JY0 434 aaKnown RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 MYOCQ99972 504 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 C11orf84Q9BUA3 381 aaPredicted RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 ALG13Q9NP73 1137 aaKnown RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 SAYSD1Q9NPB0 183 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 BLOC1S4Q9NUP1 217 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 SRP68Q9UHB9 627 aaKnown RBP8.86□□□□□ -0.99
VMP1-208ENST00000588617 MID2Q9UJV3 735 aa8.86□□□□□ -0.99
VMP1-208ENST00000588617 A0A087WWL8 130 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 ASNA1O43681 348 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 GRPP07492 148 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 COPAP53621 1224 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 NCKAP1LP55160 1127 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 UCP3P55916 312 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 PSMC1P62191 440 aaKnown RBP8.85□□□□□ -0.99
VMP1-208ENST00000588617 POU6F2P78424 691 aaPredicted RBP8.85□□□□□ -0.99
VMP1-208ENST00000588617 TOP3AQ13472 1001 aaPredicted RBP8.85□□□□□ -0.99
VMP1-208ENST00000588617 ZNF792Q3KQV3 632 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 FYB2Q5VWT5 728 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 ARL6IP4Q66PJ3 421 aaKnown RBP8.85□□□□□ -0.99
VMP1-208ENST00000588617 TRIM68Q6AZZ1 485 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 C2CD5Q86YS7 1000 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 KYQ8NBH2 561 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 SIMC1Q8NDZ2 872 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 SPPL3Q8TCT6 385 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 DHX36Q9H2U1 1008 aaKnown RBP8.85□□□□□ -0.99
VMP1-208ENST00000588617 POLG2Q9UHN1 485 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 HERC5Q9UII4 1024 aaKnown RBP8.85□□□□□ -0.99
VMP1-208ENST00000588617 TMX2Q9Y320 296 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 PLEKHM1Q9Y4G2 1056 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 ATRNL1Q5VV63 1379 aa8.85□□□□□ -0.99
VMP1-208ENST00000588617 SCO2A0A1W2PP80 73 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 TCRBV7S2A1N4TA0A589 114 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 HMX3A6NHT5 357 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 MTSS1O43312 755 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 FIBPO43427 364 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 SOAT2O75908 522 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 DNAJB5O75953 348 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 BAIAP3O94812 1187 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 A1BGP04217 495 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 ITGA2BP08514 1039 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 ETV4P43268 484 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 TUBP50607 506 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 PCOLCEQ15113 449 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 C4orf50Q6ZRC1 276 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 LARP4Q71RC2 724 aaKnown RBP eCLIP8.84□□□□□ -0.99
VMP1-208ENST00000588617 GATAD2AQ86YP4 633 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 IRF2BP1Q8IU81 584 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 CCDC117Q8IWD4 279 aaPredicted RBP8.84□□□□□ -0.99
VMP1-208ENST00000588617 TTLL6Q8N841 843 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 PCYOX1LQ8NBM8 494 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 SPSB4Q96A44 273 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 KATNBL1Q9H079 304 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 MLXIPQ9HAP2 919 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 HEYLQ9NQ87 328 aaPredicted RBP8.84□□□□□ -0.99
VMP1-208ENST00000588617 RLIMQ9NVW2 624 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 CLIC5Q9NZA1 410 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 AFG3L2Q9Y4W6 797 aa8.84□□□□□ -0.99
VMP1-208ENST00000588617 IRS2Q9Y4H2 1338 aa8.83□□□□□ -1
VMP1-208ENST00000588617 HOXC11O43248 304 aaPredicted RBP8.83□□□□□ -1
VMP1-208ENST00000588617 SLC43A1O75387 559 aa8.83□□□□□ -1
VMP1-208ENST00000588617 TOX4O94842 621 aa8.83□□□□□ -1
VMP1-208ENST00000588617 ATP1A3P13637 1013 aa8.83□□□□□ -1
VMP1-208ENST00000588617 PFKLP17858 780 aa8.83□□□□□ -1
VMP1-208ENST00000588617 SPINK2P20155 84 aa8.83□□□□□ -1
VMP1-208ENST00000588617 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
VMP1-208ENST00000588617 SSTR4P31391 388 aa8.83□□□□□ -1
VMP1-208ENST00000588617 CASRP41180 1078 aa8.83□□□□□ -1
VMP1-208ENST00000588617 PAPOLAP51003 745 aaKnown RBP8.83□□□□□ -1
VMP1-208ENST00000588617 MLLT6P55198 1093 aaPredicted RBP8.83□□□□□ -1
VMP1-208ENST00000588617 POLE2P56282 527 aa8.83□□□□□ -1
VMP1-208ENST00000588617 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
VMP1-208ENST00000588617 FAM47AQ5JRC9 791 aa8.83□□□□□ -1
VMP1-208ENST00000588617 KRT40Q6A162 431 aa8.83□□□□□ -1
VMP1-208ENST00000588617 OTUD7BQ6GQQ9 843 aa8.83□□□□□ -1
VMP1-208ENST00000588617 KRT28Q7Z3Y7 464 aa8.83□□□□□ -1
VMP1-208ENST00000588617 AOPEPQ8N6M6 819 aa8.83□□□□□ -1
VMP1-208ENST00000588617 OR5M3Q8NGP4 307 aa8.83□□□□□ -1
VMP1-208ENST00000588617 ZBTB10Q96DT7 871 aa8.83□□□□□ -1
VMP1-208ENST00000588617 MS4A7Q9GZW8 240 aaPredicted RBP8.83□□□□□ -1
VMP1-208ENST00000588617 IRAK4Q9NWZ3 460 aa8.83□□□□□ -1
VMP1-208ENST00000588617 SLC23A1Q9UHI7 598 aa8.83□□□□□ -1
VMP1-208ENST00000588617 SLC45A1Q9Y2W3 748 aa8.83□□□□□ -1
VMP1-208ENST00000588617 SETD1BQ9UPS6 1966 aaKnown RBP8.82□□□□□ -1
VMP1-208ENST00000588617 A0A087WZ62 844 aa8.82□□□□□ -1
VMP1-208ENST00000588617 A6NCN8 305 aa8.82□□□□□ -1
VMP1-208ENST00000588617 ZNF785A8K8V0 405 aa8.82□□□□□ -1
VMP1-208ENST00000588617 RAB27BO00194 218 aa8.82□□□□□ -1
VMP1-208ENST00000588617 HRKO00198 91 aa8.82□□□□□ -1
VMP1-208ENST00000588617 FCHO1O14526 889 aa8.82□□□□□ -1
VMP1-208ENST00000588617 ATP5JP18859 108 aa8.82□□□□□ -1
VMP1-208ENST00000588617 ADD2P35612 726 aa8.82□□□□□ -1
VMP1-208ENST00000588617 LIFRP42702 1097 aa8.82□□□□□ -1
VMP1-208ENST00000588617 MRE11P49959 708 aa8.82□□□□□ -1
VMP1-208ENST00000588617 APBA1Q02410 837 aa8.82□□□□□ -1
VMP1-208ENST00000588617 PTH1RQ03431 593 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms