RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 LRRC52Q8N7C0 313 aa17.62■□□□□ 0.41
NFIX-210ENST00000588228 NOA1Q8NC60 698 aaKnown RBP17.62■□□□□ 0.41
NFIX-210ENST00000588228 APOL6Q9BWW8 343 aa17.62■□□□□ 0.41
NFIX-210ENST00000588228 CXCL16Q9H2A7 254 aa17.62■□□□□ 0.41
NFIX-210ENST00000588228 SMYD3Q9H7B4 428 aa17.62■□□□□ 0.41
NFIX-210ENST00000588228 PCDHGC3Q9UN70 934 aa17.62■□□□□ 0.41
NFIX-210ENST00000588228 MOXD2PA6NHM9 499 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 KCNK3O14649 394 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 XPOTO43592 962 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 CILPO75339 1184 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 INHAP05111 366 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 CTSHP09668 335 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 H2AFXP16104 143 aaPredicted RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 BRD2P25440 801 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 CDH8P55286 799 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 RBM10P98175 930 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 PASD1Q8IV76 773 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 SMG8Q8ND04 991 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 ZNF296Q8WUU4 475 aaPredicted RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 ZNF518BQ9C0D4 1074 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 CHST12Q9NRB3 414 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 TUBGCP4Q9UGJ1 667 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 PARP2Q9UGN5 583 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 ST3GAL5Q9UNP4 418 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 RALGAPA2Q2PPJ7 1873 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 TLR3O15455 904 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 MED7O43513 233 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 CD4P01730 458 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 YY1P25490 414 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 RAD23BP54727 409 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 INCA1Q0VD86 236 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 PTK7Q13308 1070 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 LIN9Q5TKA1 542 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 MSANTD4Q8NCY6 345 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 SPATA4Q8NEY3 305 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 RPS6KC1Q96S38 1066 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 TSEN34Q9BSV6 310 aaKnown RBP17.61■□□□□ 0.41
NFIX-210ENST00000588228 SELENOOQ9BVL4 669 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 RNF39Q9H2S5 420 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 ALG6Q9Y672 507 aa17.61■□□□□ 0.41
NFIX-210ENST00000588228 SMIM28A0A1B0GU29 152 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 GPR182O15218 404 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 CDH5P33151 784 aaPredicted RBP17.6■□□□□ 0.41
NFIX-210ENST00000588228 THPOP40225 353 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 PTPROQ16827 1216 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 GLRA4Q5JXX5 417 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 FBXO38Q6PIJ6 1188 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 TMEM35BQ8NCS4 154 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 WHAMMQ8TF30 809 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 TFAP2BQ92481 460 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 C18orf25Q96B23 403 aaPredicted RBP17.6■□□□□ 0.41
NFIX-210ENST00000588228 MS4A14Q96JA4 679 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 ZSWIM1Q9BR11 485 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 EPC1Q9H2F5 836 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 ANKZF1Q9H8Y5 726 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 HMX1Q9NP08 348 aaPredicted RBP17.6■□□□□ 0.41
NFIX-210ENST00000588228 ADAM22Q9P0K1 906 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 CHORDC1Q9UHD1 332 aaPredicted RBP17.6■□□□□ 0.41
NFIX-210ENST00000588228 BARX2Q9UMQ3 279 aaPredicted RBP17.6■□□□□ 0.41
NFIX-210ENST00000588228 CEP83Q9Y592 693 aa17.6■□□□□ 0.41
NFIX-210ENST00000588228 TRIP12Q14669 1992 aaPredicted RBP17.6■□□□□ 0.41
NFIX-210ENST00000588228 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
NFIX-210ENST00000588228 ATF7P17544 494 aaPredicted RBP17.59■□□□□ 0.41
NFIX-210ENST00000588228 CYP3A5P20815 502 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 RRM1P23921 792 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 GRK4P32298 578 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 SSTR3P32745 418 aaPredicted RBP17.59■□□□□ 0.41
NFIX-210ENST00000588228 PTP4A2Q12974 167 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 NFX1Q12986 1120 aaKnown RBP17.59■□□□□ 0.41
NFIX-210ENST00000588228 MESDQ14696 234 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 HACE1Q8IYU2 909 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 PDCL2Q8N4E4 241 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 MMGT1Q8N4V1 131 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 SLC4A11Q8NBS3 891 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 ACTRT1Q8TDG2 376 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 TMEM176AQ96HP8 235 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 GLT1D1Q96MS3 346 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 C11orf70Q9BRQ4 267 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 PARD6BQ9BYG5 372 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 ELOVL4Q9GZR5 314 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 ARGLU1Q9NWB6 273 aaPredicted RBP17.59■□□□□ 0.41
NFIX-210ENST00000588228 EHD2Q9NZN4 543 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 KLK14Q9P0G3 267 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 NOD1Q9Y239 953 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 MYH10P35580 1976 aa17.59■□□□□ 0.41
NFIX-210ENST00000588228 DDX3YO15523 660 aaKnown RBP17.58■□□□□ 0.41
NFIX-210ENST00000588228 TUBBP07437 444 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 CD19P15391 556 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 MMP8P22894 467 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 HTRA3P83110 453 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 C2orf54Q08AI8 447 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 LHX8Q68G74 356 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 MTERF4Q7Z6M4 381 aaKnown RBP17.58■□□□□ 0.41
NFIX-210ENST00000588228 LHX5Q9H2C1 402 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 MRPL47Q9HD33 250 aaKnown RBP17.58■□□□□ 0.41
NFIX-210ENST00000588228 ERVK-5Q9HDB9 667 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 FAM105AQ9NUU6 356 aa17.58■□□□□ 0.41
NFIX-210ENST00000588228 SMARCAL1Q9NZC9 954 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms