RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PLA2G4BP0C869 781 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 GAP43P17677 238 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 CCNE1P24864 410 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 HOXC13P31276 330 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 CLCN1P35523 988 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 ARL2P36404 184 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 STARD6P59095 220 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 MCM6Q14566 821 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 MLF2Q15773 248 aaPredicted RBP8.5□□□□□ -1.05
VMP1-204ENST00000587259 PSMD5Q16401 504 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 SLC5A9Q2M3M2 681 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 SLC44A4Q53GD3 710 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 GLRA4Q5JXX5 417 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 PPM1LQ5SGD2 360 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 KLHL10Q6JEL2 608 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 OTUD6AQ7L8S5 288 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 SYT2Q8N9I0 419 aaPredicted RBP8.5□□□□□ -1.05
VMP1-204ENST00000587259 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 LNX1Q8TBB1 728 aaPredicted RBP8.5□□□□□ -1.05
VMP1-204ENST00000587259 BSNDQ8WZ55 320 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 RUBCNQ92622 972 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 DDX12PQ92771 950 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 NACC1Q96RE7 527 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 PLIN2Q99541 437 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 KIFC3Q9BVG8 833 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 TIPINQ9BVW5 301 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 PLEKHA4Q9H4M7 779 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 ZSWIM4Q9H7M6 989 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 GOLGA2P5Q9HBQ8 144 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 UBN1Q9NPG3 1134 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 SLC2A4RGQ9NR83 387 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 ZDHHC7Q9NXF8 308 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.5□□□□□ -1.05
VMP1-204ENST00000587259 FNIP2Q9P278 1114 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 DNMT3BQ9UBC3 853 aaKnown RBP8.5□□□□□ -1.05
VMP1-204ENST00000587259 SEL1LQ9UBV2 794 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 SSX2IPQ9Y2D8 614 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 GIT1Q9Y2X7 761 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 PCDHGA10Q9Y5H3 936 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
VMP1-204ENST00000587259 ITIH6Q6UXX5 1313 aa8.5□□□□□ -1.05
VMP1-204ENST00000587259 A0A1B0GTH6 734 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 KANSL1LA0AUZ9 987 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 FRMD3A2A2Y4 597 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 CARNS1A5YM72 827 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 MYMKA6NI61 221 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 SHISA7A6NL88 538 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 DPYSL4O14531 572 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 ASAP2O43150 1006 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 AP5Z1O43299 807 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 TBCAO75347 108 aaKnown RBP8.49□□□□□ -1.05
VMP1-204ENST00000587259 RECQL4O94761 1208 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 GNA14O95837 355 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 IDEP14735 1019 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 TARSP26639 723 aaKnown RBP8.49□□□□□ -1.05
VMP1-204ENST00000587259 AXLP30530 894 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 OR1D2P34982 312 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 PRCPP42785 496 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 RARRES1P49788 294 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 SLC12A3P55017 1021 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 GRIK3Q13003 919 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 TFDP1Q14186 410 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 GRM2Q14416 872 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 MXD4Q14582 209 aaPredicted RBP8.49□□□□□ -1.05
VMP1-204ENST00000587259 NAB2Q15742 525 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 FAM26FQ5R3K3 315 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 SPECC1LQ69YQ0 1117 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 SLC27A1Q6PCB7 646 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 TPRG1Q6ZUI0 275 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 CCDC186Q7Z3E2 898 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 GPBP1Q86WP2 473 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 CATSPER3Q86XQ3 398 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 VSTM4Q8IW00 320 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 MCRS1Q96EZ8 462 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
VMP1-204ENST00000587259 HSD17B14Q9BPX1 270 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 TTPALQ9BTX7 342 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 RHOBTB2Q9BYZ6 727 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 HSD3B7Q9H2F3 369 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 PDZD7Q9H5P4 517 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 HEBP1Q9NRV9 189 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 PANK4Q9NVE7 773 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 STK39Q9UEW8 545 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 LIMA1Q9UHB6 759 aaKnown RBP8.49□□□□□ -1.05
VMP1-204ENST00000587259 ODF2LQ9ULJ1 636 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 GDAQ9Y2T3 454 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 NOTCH4Q99466 2003 aa8.49□□□□□ -1.05
VMP1-204ENST00000587259 SF3B1O75533 1304 aaKnown RBP eCLIP8.49□□□□□ -1.05
VMP1-204ENST00000587259 VWA8A3KMH1 1905 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 MTCL1Q9Y4B5 1905 aaKnown RBP8.48□□□□□ -1.05
VMP1-204ENST00000587259 EPG5Q9HCE0 2579 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 A0A1B0GUA9 196 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 DCDC2BA2VCK2 349 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 LRRC10BA6NIK2 292 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 KCNJ18B7U540 433 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 LAMTOR5O43504 91 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 MED24O75448 989 aa8.48□□□□□ -1.05
VMP1-204ENST00000587259 PAPLNO95428 1278 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms