RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PROSCO94903 275 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 F2P00734 622 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 VTNP04004 478 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 ARF4P18085 180 aaPredicted RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 EIF4BP23588 611 aaKnown RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 RRM1P23921 792 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 AXLP30530 894 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 POLR2BP30876 1174 aaKnown RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 GRM5P41594 1212 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 CARSP49589 748 aaKnown RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 CPT1AP50416 773 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 OSTNP61366 133 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 TMEM132DQ14C87 1099 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 TERF2Q15554 542 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 PLEKHA7Q6IQ23 1121 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 SLC13A5Q86YT5 568 aaPredicted RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 GSPT2Q8IYD1 628 aaKnown RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 KIAA0319LQ8IZA0 1049 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 SEC14L1Q92503 715 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 KRT35Q92764 455 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 ELMO3Q96BJ8 720 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 LRRC45Q96CN5 670 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 ZNF668Q96K58 619 aaPredicted RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 ACAP3Q96P50 834 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 KATNAL1Q9BW62 490 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 BCO2Q9BYV7 579 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 AP5M1Q9H0R1 490 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 DDX47Q9H0S4 455 aaKnown RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 XYLT2Q9H1B5 865 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 PLEKHA5Q9HAU0 1116 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 IP6K2Q9UHH9 426 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 ITGA11Q9UKX5 1188 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 STRIP2Q9ULQ0 834 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 NFU1Q9UMS0 254 aa11.98□□□□□ -0.49
LIG3-204ENST00000585740 GNEQ9Y223 722 aaKnown RBP11.98□□□□□ -0.49
LIG3-204ENST00000585740 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 A0A1B0GUA9 196 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 GOLGA8KD6RF30 607 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 H3BQF6 201 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 PODXLO00592 558 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 POLR3GO15318 223 aaPredicted RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 NFICP08651 508 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 KRT19P08727 400 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 IQCF3P0C7M6 154 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 ITGA4P13612 1032 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 MMP8P22894 467 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 CETN2P41208 172 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 ASPAP45381 313 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 FNTAP49354 379 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 DRG2P55039 364 aaKnown RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 RBP5P82980 135 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 LACTBP83111 547 aaPredicted RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 DR1Q01658 176 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 ZNF211Q13398 564 aaPredicted RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 HLTFQ14527 1009 aaKnown RBP eCLIP11.97□□□□□ -0.49
LIG3-204ENST00000585740 CYP1B1Q16678 543 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 MARCH8Q5T0T0 291 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 JADE1Q6IE81 842 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 C17orf99Q6UX52 265 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 CEP120Q8N960 986 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 C1orf127Q8N9H9 656 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 C12orf50Q8NA57 414 aaPredicted RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 FEZF2Q8TBJ5 459 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 USP6NLQ92738 828 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 ZBTB10Q96DT7 871 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 C11orf70Q9BRQ4 267 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 FAM129AQ9BZQ8 928 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 LHX5Q9H2C1 402 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 ZFYVE28Q9HCC9 887 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 PCYOX1Q9UHG3 505 aa11.97□□□□□ -0.49
LIG3-204ENST00000585740 PDCD11Q14690 1871 aaKnown RBP11.97□□□□□ -0.49
LIG3-204ENST00000585740 MBLAC1A4D2B0 266 aaPredicted RBP11.96□□□□□ -0.49
LIG3-204ENST00000585740 IGF2BP3O00425 579 aaKnown RBP eCLIP11.96□□□□□ -0.49
LIG3-204ENST00000585740 KPNA6O60684 536 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 CALCAP01258 141 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.49
LIG3-204ENST00000585740 SMIM10L2AP0DMW4 78 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 SMIM10L2BP0DMW5 78 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 GNAT1P11488 350 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 CYP2C9P11712 490 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 CD58P19256 250 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 HSPA9P38646 679 aaKnown RBP11.96□□□□□ -0.49
LIG3-204ENST00000585740 PSEN2P49810 448 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 MRPS25P82663 173 aaKnown RBP11.96□□□□□ -0.49
LIG3-204ENST00000585740 SREBF2Q12772 1141 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 MAMLD1Q13495 774 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 MTMR3Q13615 1198 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 MFSD10Q14728 455 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 SLC10A6Q3KNW5 377 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 SPDYCQ5MJ68 293 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 CFAP58Q5T655 872 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 DNAJC24Q6P3W2 148 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 NOTUMQ6P988 496 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 MMS22LQ6ZRQ5 1243 aa11.96□□□□□ -0.49
LIG3-204ENST00000585740 CDR2LQ86X02 465 aaPredicted RBP11.96□□□□□ -0.49
LIG3-204ENST00000585740 PASD1Q8IV76 773 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms