RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 RFPL2O75678 378 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
ERBB2-222ENST00000584908 ATF2P15336 505 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 MCCD1P59942 119 aaPredicted RBP17.52■□□□□ 0.4
ERBB2-222ENST00000584908 RBP5P82980 135 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.4
ERBB2-222ENST00000584908 OVOS1Q6IE37 1185 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 USP37Q86T82 979 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 CSGALNACT2Q8N6G5 542 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 PARD3BQ8TEW8 1205 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 FAM84AQ96KN4 292 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 IPO9Q96P70 1041 aaKnown RBP17.52■□□□□ 0.4
ERBB2-222ENST00000584908 FNBP1Q96RU3 617 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 GDAP2Q9NXN4 497 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 MAPK8IP1Q9UQF2 711 aa17.52■□□□□ 0.4
ERBB2-222ENST00000584908 TIMM13Q9Y5L4 95 aaPredicted RBP17.52■□□□□ 0.4
ERBB2-222ENST00000584908 DOCK8Q8NF50 2099 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 CYB561D2O14569 222 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 TNNC2P02585 160 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 C8AP07357 584 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 WEE2P0C1S8 567 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 EDRF1Q3B7T1 1238 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 LIN9Q5TKA1 542 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 SCARA3Q6AZY7 606 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 CCDC149Q6ZUS6 474 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 TRAPPC11Q7Z392 1133 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 TCEAL8Q8IYN2 117 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 PLEKHO2Q8TD55 490 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
ERBB2-222ENST00000584908 USTQ9Y2C2 406 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 NOTCH4Q99466 2003 aa17.51■□□□□ 0.39
ERBB2-222ENST00000584908 DLATP10515 647 aaKnown RBP17.5■□□□□ 0.39
ERBB2-222ENST00000584908 TNNI1P19237 187 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 PRCPP42785 496 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 CASP4P49662 377 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 AP3M2P53677 418 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 ENPEPQ07075 957 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 GPR17Q13304 367 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 CENPPQ6IPU0 288 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 LIMS2Q7Z4I7 341 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-222ENST00000584908 SPATA18Q8TC71 538 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 SMG7Q92540 1137 aaKnown RBP17.5■□□□□ 0.39
ERBB2-222ENST00000584908 ZNF516Q92618 1163 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 CCDC127Q96BQ5 260 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 WDR6Q9NNW5 1121 aaKnown RBP17.5■□□□□ 0.39
ERBB2-222ENST00000584908 AFF4Q9UHB7 1163 aaKnown RBP17.5■□□□□ 0.39
ERBB2-222ENST00000584908 NR2E1Q9Y466 385 aa17.5■□□□□ 0.39
ERBB2-222ENST00000584908 NR2F2P24468 414 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 RPL13P26373 211 aaKnown RBP17.49■□□□□ 0.39
ERBB2-222ENST00000584908 SSTR3P32745 418 aaPredicted RBP17.49■□□□□ 0.39
ERBB2-222ENST00000584908 MYO1EQ12965 1108 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 PPM1LQ5SGD2 360 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 SLC7A14Q8TBB6 771 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 RTP3Q9BQQ7 232 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 FRMD4BQ9Y2L6 1034 aa17.49■□□□□ 0.39
ERBB2-222ENST00000584908 LRRIQ3A6PVS8 624 aaPredicted RBP17.48■□□□□ 0.39
ERBB2-222ENST00000584908 IKBKBO14920 756 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 AKAP3O75969 853 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 STAU1O95793 577 aaKnown RBP17.48■□□□□ 0.39
ERBB2-222ENST00000584908 KRT19P08727 400 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 WSCD1Q658N2 575 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 DPH6Q7L8W6 267 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 ZC3H3Q8IXZ2 948 aaKnown RBP17.48■□□□□ 0.39
ERBB2-222ENST00000584908 TMEM86AQ8N2M4 240 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 TOP6BLQ8N6T0 577 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 L1RE1Q9UN81 338 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 MYO10Q9HD67 2058 aa17.48■□□□□ 0.39
ERBB2-222ENST00000584908 HUS1O60921 280 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 XYLBO75191 536 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 SEC24AO95486 1093 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 VNN2O95498 520 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 CST3P01034 146 aaPredicted RBP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 CPB1P15086 417 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 BMP6P22004 513 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ELF1P32519 619 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 PPP1R2P41236 205 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ARPP19P56211 112 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 BFSP1Q12934 665 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ADAM9Q13443 819 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 MORC3Q14149 939 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 C1orf220Q5T0J3 134 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 RNF19BQ6ZMZ0 732 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 PDCL2Q8N4E4 241 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 OR10T2Q8NGX3 314 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 KHSRPQ92945 711 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 HPDLQ96IR7 371 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 RPGRIP1Q96KN7 1286 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 MKNK1Q9BUB5 465 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ZCWPW1Q9H0M4 648 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 HSFX1Q9UBD0 423 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms