RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 FOXR1Q6PIV2 292 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 MPZL3Q6UWV2 235 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 ZNF354CQ86Y25 554 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 USP38Q8NB14 1042 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 PGLYRP2Q96PD5 576 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 GGT7Q9UJ14 662 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 CLTAP09496 248 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 HNRNPH2P55795 449 aaKnown RBP10.92□□□□□ -0.66
RFFL-212ENST00000584655 JAM2P57087 298 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 CDR2Q01850 454 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 MMRN1Q13201 1228 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 MXD4Q14582 209 aaPredicted RBP10.92□□□□□ -0.66
RFFL-212ENST00000584655 LRRC14Q15048 493 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 SLFN12LQ6IEE8 588 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 CCDC137Q6PK04 289 aaKnown RBP10.92□□□□□ -0.66
RFFL-212ENST00000584655 CCNI2Q6ZMN8 369 aaPredicted RBP10.92□□□□□ -0.66
RFFL-212ENST00000584655 SAMD3Q8N6K7 520 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 CLEC4CQ8WTT0 213 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 PAAF1Q9BRP4 392 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 HERPUD2Q9BSE4 406 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 FBXL5Q9UKA1 691 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 UTP11Q9Y3A2 253 aaKnown RBP10.92□□□□□ -0.66
RFFL-212ENST00000584655 UBE4BO95155 1302 aa10.92□□□□□ -0.66
RFFL-212ENST00000584655 LRRC37AA6NMS7 1700 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 TNS1Q9HBL0 1735 aaKnown RBP10.91□□□□□ -0.66
RFFL-212ENST00000584655 GOLGA6CA6NDK9 693 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 ZBTB42B2RXF5 422 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 SGK1O00141 431 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 C2CD2LO14523 706 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 GOLGA6DP0CG33 693 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 LMO2P25791 158 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 MOGSQ13724 837 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 IFT20Q8IY31 132 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 TXLNBQ8N3L3 684 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 FBXO25Q8TCJ0 367 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 SH3TC2Q8TF17 1288 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 GOLGA6AQ9NYA3 693 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 RTN2O75298 545 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 CD48P09326 243 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 RFC1P35251 1148 aaPredicted RBP10.91□□□□□ -0.66
RFFL-212ENST00000584655 MLH1P40692 756 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 NOL9Q5SY16 702 aaKnown RBP10.91□□□□□ -0.66
RFFL-212ENST00000584655 LIN9Q5TKA1 542 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 MTHFD1LQ6UB35 978 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 ANKMY2Q8IV38 441 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 ZMAT2Q96NC0 199 aaKnown RBP10.91□□□□□ -0.66
RFFL-212ENST00000584655 KCNK9Q9NPC2 374 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 ADAM21Q9UKJ8 722 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 DAAM1Q9Y4D1 1078 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 STAM2O75886 525 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 MMP3P08254 477 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 SLC10A6Q3KNW5 377 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 RGMBQ6NW40 437 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 CCDC62Q6P9F0 684 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 LEKR1Q6ZMV7 388 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 MDM1Q8TC05 714 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 TCP11Q8WWU5 503 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 BEGAINQ9BUH8 593 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 ABHD16BQ9H3Z7 469 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
RFFL-212ENST00000584655 GOLGA6L10A6NI86 522 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 POC1B-GALNT4F8VUJ3 575 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 C22orf31O95567 290 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 C4BPAP04003 597 aaKnown RBP10.9□□□□□ -0.66
RFFL-212ENST00000584655 TUBB4AP04350 444 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 LDLRAD1Q5T700 205 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 FAM71AQ8IYT1 594 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 SHC3Q92529 594 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.9□□□□□ -0.662e-7■■■□□ 18.7
RFFL-212ENST00000584655 PLAAQ9Y263 795 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 TGFB3P10600 412 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 GUCY1A3Q02108 690 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 MFSD10Q14728 455 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 FSCN1Q16658 493 aaKnown RBP10.9□□□□□ -0.66
RFFL-212ENST00000584655 NPNTQ6UXI9 565 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 ZNF365Q70YC5 407 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 CFAP57Q96MR6 1250 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
RFFL-212ENST00000584655 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 SDCBP2Q9H190 292 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 SYNPO2Q9UMS6 1093 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 PCDHB2Q9Y5E7 798 aa10.9□□□□□ -0.66
RFFL-212ENST00000584655 ACKR2O00590 384 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 OR4Q2P0C623 313 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 CCND3P30281 292 aaPredicted RBP10.9□□□□□ -0.67
RFFL-212ENST00000584655 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.67
RFFL-212ENST00000584655 GABPB1Q06547 395 aaPredicted RBP10.9□□□□□ -0.67
RFFL-212ENST00000584655 EDEM1Q92611 657 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 RNF34Q969K3 372 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 KLF6Q99612 283 aaPredicted RBP10.9□□□□□ -0.67
RFFL-212ENST00000584655 PPP1R12CQ9BZL4 782 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 L1RE1Q9UN81 338 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.67
RFFL-212ENST00000584655 B3GAT3O94766 335 aa10.89□□□□□ -0.67
RFFL-212ENST00000584655 RARAP10276 462 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms