RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PDXKO00764 312 aa29.3■■■□□ 2.28
SMARCD2-210ENST00000584400 LRG1P02750 347 aa29.3■■■□□ 2.28
SMARCD2-210ENST00000584400 KRT19P08727 400 aa29.3■■■□□ 2.28
SMARCD2-210ENST00000584400 TMEM174Q8WUU8 243 aa29.3■■■□□ 2.28
SMARCD2-210ENST00000584400 MTMR12Q9C0I1 747 aa29.3■■■□□ 2.28
SMARCD2-210ENST00000584400 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.3■■■□□ 2.286e-10■□□□□ 10.6
SMARCD2-210ENST00000584400 CCL16O15467 120 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 CALUO43852 315 aaPredicted RBP29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 MYO1EQ12965 1108 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 PSMD6Q15008 389 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 TMEM31Q5JXX7 168 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 SLC9A9Q8IVB4 645 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 TIGD1Q96MW7 591 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 CHMP5Q9NZZ3 219 aa29.29■■■□□ 2.28
SMARCD2-210ENST00000584400 TNNI1P19237 187 aa29.28■■■□□ 2.28
SMARCD2-210ENST00000584400 GBP2P32456 591 aaPredicted RBP29.28■■■□□ 2.28
SMARCD2-210ENST00000584400 CYP24A1Q07973 514 aa29.28■■■□□ 2.28
SMARCD2-210ENST00000584400 ADCY1Q08828 1119 aa29.28■■■□□ 2.28
SMARCD2-210ENST00000584400 GPR17Q13304 367 aa29.28■■■□□ 2.28
SMARCD2-210ENST00000584400 FEZF2Q8TBJ5 459 aa29.28■■■□□ 2.28
SMARCD2-210ENST00000584400 GPR37L1O60883 481 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 SMC2O95347 1197 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 DLATP10515 647 aaKnown RBP29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 FSHRP23945 695 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 SNW1Q13573 536 aaKnown RBP29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 PTPN21Q16825 1174 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 GRASPQ7Z6J2 395 aaPredicted RBP29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 ELMOD1Q8N336 334 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 ENGASEQ8NFI3 743 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 EDAQ92838 391 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 CCDC127Q96BQ5 260 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 BORCS6Q96GS4 357 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 KCTD10Q9H3F6 313 aa29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 ZFP37Q9Y6Q3 630 aaPredicted RBP29.27■■■□□ 2.28
SMARCD2-210ENST00000584400 HUS1O60921 280 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 GUF1Q8N442 669 aaKnown RBP29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 MFSD14AQ96MC6 490 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 CGRRF1Q99675 332 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 GTPBP4Q9BZE4 634 aaKnown RBP29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 LIMD1Q9UGP4 676 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 SORCS3Q9UPU3 1222 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 INSL5Q9Y5Q6 135 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 MUC3AQ02505 3323 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 TCHHQ07283 1943 aa29.26■■■□□ 2.27
SMARCD2-210ENST00000584400 BFSP1Q12934 665 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 PLD1Q13393 1074 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 LMBRD2Q68DH5 695 aaPredicted RBP29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 RNF19BQ6ZMZ0 732 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 GET4Q7L5D6 327 aaPredicted RBP29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 TMEM86AQ8N2M4 240 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 SPATA18Q8TC71 538 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 GSDMAQ96QA5 445 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 DMAC2Q9NW81 257 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 GDAP2Q9NXN4 497 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 TRAF3IP3Q9Y228 551 aa29.25■■■□□ 2.27
SMARCD2-210ENST00000584400 NR3C1P04150 777 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 AP3M2P53677 418 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 ZXDAP98168 799 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 SMARCB1Q12824 385 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 MTMR3Q13615 1198 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 WSCD1Q658N2 575 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 IQCEQ6IPM2 695 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 OR5B17Q8NGF7 314 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 IGSF9Q9P2J2 1179 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 HSFX1Q9UBD0 423 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 FRMD4BQ9Y2L6 1034 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 NCOR1O75376 2440 aa29.24■■■□□ 2.27
SMARCD2-210ENST00000584400 KINO60870 393 aaKnown RBP29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 PTPN2P17706 415 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 RPL13P26373 211 aaKnown RBP29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 PNOCQ13519 176 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 PABPC1LQ4VXU2 614 aaKnown RBP29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 DPH6Q7L8W6 267 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 TRAPPC11Q7Z392 1133 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 ELOA2Q8IYF1 753 aaPredicted RBP29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 UBALD2Q8IYN6 164 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 CXorf38Q8TB03 319 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 NXPE3Q969Y0 559 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 HPDLQ96IR7 371 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 EPS15L1Q9UBC2 864 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 SIX4Q9UIU6 781 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 SNX9Q9Y5X1 595 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 ANK1P16157 1881 aa29.23■■■□□ 2.27
SMARCD2-210ENST00000584400 PTPRJQ12913 1337 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 MTCL1Q9Y4B5 1905 aaKnown RBP29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 SEC24AO95486 1093 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 OR4Q2P0C623 313 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 NFIL3Q16649 462 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 DCP1BQ8IZD4 617 aaKnown RBP29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 TOP6BLQ8N6T0 577 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 C2orf15Q8WU43 125 aaKnown RBP29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 SMARCE1Q969G3 411 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 ZNF512Q96ME7 567 aaPredicted RBP29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 PGLYRP2Q96PD5 576 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 ZCWPW1Q9H0M4 648 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 MAPK8IP1Q9UQF2 711 aa29.22■■■□□ 2.27
SMARCD2-210ENST00000584400 PRR33A8MZF0 331 aa29.21■■■□□ 2.27
SMARCD2-210ENST00000584400 MYL7Q01449 175 aa29.21■■■□□ 2.27
SMARCD2-210ENST00000584400 TSPY1Q01534 308 aa29.21■■■□□ 2.27
SMARCD2-210ENST00000584400 TRPC3Q13507 836 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms