RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 TWF1Q12792 350 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MTAPQ13126 283 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 FZD5Q13467 585 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 RSPO4Q2I0M5 234 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ARL6IP4Q66PJ3 421 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 TSSK4Q6SA08 328 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 DTHD1Q6ZMT9 781 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 KRBA2Q6ZNG9 492 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 DEPDC1BQ8WUY9 529 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 FAM3CQ92520 227 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SMARCD2Q92925 531 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PDLIM2Q96JY6 352 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZBTB45Q96K62 511 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 NTPCRQ9BSD7 190 aaKnown RBP10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 IER2Q9BTL4 223 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CHRDQ9H2X0 955 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ASAH2Q9NR71 780 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CEP72Q9P209 647 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 GMEB2Q9UKD1 530 aa10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SHISA7A6NL88 538 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZNF263O14978 683 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MEFVO15553 781 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CAVIN2O95810 425 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PLS3P13797 630 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CDC25AP30304 524 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MATR3P43243 847 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 EPHA5P54756 1037 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 NRLP54845 237 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PLD1Q13393 1074 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PPP2R5DQ14738 602 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZRSR1Q15695 479 aaKnown RBP10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SLC10A6Q3KNW5 377 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 VITQ6UXI7 678 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZPBP2Q6X784 338 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 KCNK18Q7Z418 384 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZSCAN18Q8TBC5 510 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 FAM200AQ8TCP9 573 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 E2F7Q96AV8 911 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 EPSTI1Q96J88 318 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 OXCT2Q9BYC2 517 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 GPR88Q9GZN0 384 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PLEKHA5Q9HAU0 1116 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CBX8Q9HC52 389 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZNF334Q9HCZ1 680 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 TRPV5Q9NQA5 729 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 TUBGCP4Q9UGJ1 667 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 YIPF1Q9Y548 306 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PIAS3Q9Y6X2 628 aa10.54□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PDCD11Q14690 1871 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 EP300Q09472 2414 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 A0A087X0B3 334 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 PRR5-ARHGAP8B1AHC4 643 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 H0YCG3 227 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 M0QZQ0 153 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 POLR2DO15514 142 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CLDN3O15551 220 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 XPOTO43592 962 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MOSPD3O75425 235 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 OAZ2O95190 189 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CLTAP09496 248 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CXCL8P10145 99 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MAPTP10636 758 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 GJA1P17302 382 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 LRPAP1P30533 357 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 VIPR2P41587 438 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CCR3P51677 355 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ARHGAP8P85298 464 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 LMNB2Q03252 620 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 YWHAHQ04917 246 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MCL1Q07820 350 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 RAD51AP2Q09MP3 1159 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CCDC173Q0VFZ6 552 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 IQCB1Q15051 598 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 TEAD2Q15562 447 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ANO6Q4KMQ2 910 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MAMSTRQ6ZN01 415 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 USP37Q86T82 979 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MFSD6LQ8IWD5 586 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 YAF2Q8IY57 180 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZNF687Q8N1G0 1237 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 KCTD17Q8N5Z5 321 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 TMEM161BQ8NDZ6 487 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CSGALNACT1Q8TDX6 532 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ERCC4Q92889 916 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 KIF12Q96FN5 646 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 BICD1Q96G01 975 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 CDK5RAP3Q96JB5 506 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 ZSWIM3Q96MP5 696 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 MMTAG2Q9BU76 263 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 SLITRK6Q9H5Y7 841 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 LMAN1LQ9HAT1 526 aa10.53□□□□□ -0.72
CDK5RAP3-227ENST00000583352 TRPV4Q9HBA0 871 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms