RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 MYH11P35749 1972 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 MTMR11A4FU01 709 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 SPECC1L-ADORA2AF8WAN1 911 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 PPEF2O14830 753 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 LRP3O75074 770 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 PAPSS2O95340 614 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-221ENST00000583080 GUCY2CP25092 1073 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 TNFSF9P41273 254 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 MLLT6P55198 1093 aaPredicted RBP17.59■□□□□ 0.41
SREBF1-221ENST00000583080 MCL1Q07820 350 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 PLD1Q13393 1074 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 ZRSR1Q15695 479 aaKnown RBP17.59■□□□□ 0.41
SREBF1-221ENST00000583080 GAREM2Q75VX8 874 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 SPIRE2Q8WWL2 714 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 E2F7Q96AV8 911 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 KIF12Q96FN5 646 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 MSANTD3Q96H12 275 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 TMEM209Q96SK2 561 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 LLPHQ9BRT6 129 aaKnown RBP17.59■□□□□ 0.41
SREBF1-221ENST00000583080 NTPCRQ9BSD7 190 aaKnown RBP17.59■□□□□ 0.41
SREBF1-221ENST00000583080 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 GPR88Q9GZN0 384 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 GTSE1Q9NYZ3 720 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 STK24Q9Y6E0 443 aa17.59■□□□□ 0.41
SREBF1-221ENST00000583080 TTC26A0AVF1 554 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 MYBPHLA2RUH7 354 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 PRAMEF12O95522 483 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 PLS3P13797 630 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 CDR1P51861 262 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 EPHB3P54753 998 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 CACNB1Q02641 598 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-221ENST00000583080 GPR17Q13304 367 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 PON2Q15165 354 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 ZBTB6Q15916 424 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 CSRP2Q16527 193 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 CENPPQ6IPU0 288 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 ZPBP2Q6X784 338 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 LONP2Q86WA8 852 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 FAM160A2Q8N612 972 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-221ENST00000583080 ATAD1Q8NBU5 361 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 PNMA5Q96PV4 448 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 C8orf33Q9H7E9 229 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-221ENST00000583080 LIMCH1Q9UPQ0 1083 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 RALGAPA1Q6GYQ0 2036 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 ZFHX4Q86UP3 3567 aa17.58■□□□□ 0.4
SREBF1-221ENST00000583080 KIF26AQ9ULI4 1882 aaPredicted RBP17.58■□□□□ 0.4
SREBF1-221ENST00000583080 USP24Q9UPU5 2620 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 NPHP3-ACAD11A0A0J9YXS1 232 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 OR6C75A6NL08 312 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 CLDN3O15551 220 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 U2AF2P26368 475 aaKnown RBP eCLIP17.57■□□□□ 0.4
SREBF1-221ENST00000583080 MATR3P43243 847 aaKnown RBP eCLIP17.57■□□□□ 0.4
SREBF1-221ENST00000583080 TNK2Q07912 1038 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 OVOS1Q6IE37 1185 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 DSTYKQ6XUX3 929 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 USP37Q86T82 979 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 PLIN2Q99541 437 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 TIPINQ9BVW5 301 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 ATXN3LQ9H3M9 355 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 PLEKHA5Q9HAU0 1116 aa17.57■□□□□ 0.4
SREBF1-221ENST00000583080 UBQLN1Q9UMX0 589 aaKnown RBP17.57■□□□□ 0.4
SREBF1-221ENST00000583080 ANK1P16157 1881 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 LACTBL1A8MY62 500 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 FAM189A1O60320 539 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 SEC24BO95487 1268 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 CLTAP09496 248 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 KCNA4P22459 653 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 GABRR2P28476 465 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 ALDH1A3P47895 512 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
SREBF1-221ENST00000583080 CYP4F8P98187 520 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 PPP2R3AQ06190 1150 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 CCINQ13939 588 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 ENOX2Q16206 610 aaKnown RBP17.56■□□□□ 0.4
SREBF1-221ENST00000583080 ST3GAL2Q16842 350 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 DGKKQ5KSL6 1271 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 GPR158Q5T848 1215 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 PKN3Q6P5Z2 889 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 C1orf228Q6PIY5 440 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 DNAJB7Q7Z6W7 309 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-221ENST00000583080 RALGPS2Q86X27 583 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-221ENST00000583080 FAM184AQ8NB25 1140 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 OR10T2Q8NGX3 314 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 FAM200AQ8TCP9 573 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 PSMG2Q969U7 264 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 BICD1Q96G01 975 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 LPIN3Q9BQK8 851 aa17.56■□□□□ 0.4
SREBF1-221ENST00000583080 OXCT2Q9BYC2 517 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-221ENST00000583080 DPYSL4O14531 572 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 TYMPP19971 482 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 CYP3A5P20815 502 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 CNR2P34972 360 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 PRPHP41219 470 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 SMTNP53814 917 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 SLC12A3P55017 1021 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 MYBPC2Q14324 1141 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 ARHGAP29Q52LW3 1261 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 DTHD1Q6ZMT9 781 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 CEP68Q76N32 757 aa17.55■□□□□ 0.4
SREBF1-221ENST00000583080 SMG9Q9H0W8 520 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms