RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MRPL58Q14197 206 aaKnown RBP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 DCAF4L1Q3SXM0 396 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 CTXN3Q4LDR2 81 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 ARHGAP29Q52LW3 1261 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 EEF1DP3Q658K8 133 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 CDCA2Q69YH5 1023 aaPredicted RBP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 GPIHBP1Q8IV16 184 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 SHKBP1Q8TBC3 707 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 PIGOQ8TEQ8 1089 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 GATA6Q92908 595 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 AGXT2Q9BYV1 514 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 IL21Q9HBE4 155 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 GOLGA2P5Q9HBQ8 144 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 GPRC5CQ9NQ84 441 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 GTSE1Q9NYZ3 720 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 AFF4Q9UHB7 1163 aaKnown RBP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 FBXL5Q9UKA1 691 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 PCDHA12Q9UN75 941 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 KCNJ14Q9UNX9 436 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 CNOT1A5YKK6 2376 aaKnown RBP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 PDCD11Q14690 1871 aaKnown RBP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 CEP295Q9C0D2 2601 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 NBEAQ8NFP9 2946 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 SMIM28A0A1B0GU29 152 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 CPLX1O14810 134 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 RHOBTB1O94844 696 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 CAVIN2O95810 425 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 TOP3BO95985 862 aaKnown RBP8.35□□□□□ -1.07
CCDC47-205ENST00000582331 CEACAM1P13688 526 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 RPS6KB1P23443 525 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 EVCP57679 992 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 CREB5Q02930 508 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 PTPAQ15257 358 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 ELF2Q15723 593 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 PLK5Q496M5 336 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 SH3PXD2AQ5TCZ1 1133 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 TCEAL6Q6IPX3 200 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 APBB1IPQ7Z5R6 666 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-205ENST00000582331 ARID3BQ8IVW6 561 aaPredicted RBP8.35□□□□□ -1.07
CCDC47-205ENST00000582331 CAMKK1Q8N5S9 505 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 MCPH1Q8NEM0 835 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 DEPTORQ8TB45 409 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 ZCCHC14Q8WYQ9 949 aaKnown RBP8.35□□□□□ -1.07
CCDC47-205ENST00000582331 TCEAL3Q969E4 200 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 ZFYVE19Q96K21 471 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 LRRC3BQ96PB8 259 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 SCNM1Q9BWG6 230 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 SLC38A7Q9NVC3 462 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 ADGRG1Q9Y653 693 aa8.35□□□□□ -1.07
CCDC47-205ENST00000582331 PODXLO00592 558 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 CPB1P15086 417 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 ATP2B1P20020 1258 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 CSRP1P21291 193 aaKnown RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 MARCKSP29966 332 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 RPL9P32969 192 aaKnown RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 YARSP54577 528 aaKnown RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 SOX4Q06945 474 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 PLD1Q13393 1074 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 ITPRIPL2Q3MIP1 535 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 NT5DC1Q5TFE4 455 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 ZNF280DQ6N043 979 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 PKN3Q6P5Z2 889 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 CPLX2Q6PUV4 134 aaKnown RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 RNF19BQ6ZMZ0 732 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 PIK3AP1Q6ZUJ8 805 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 APPL2Q8NEU8 664 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 KCNB2Q92953 911 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 TMEM209Q96SK2 561 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 CCDC94Q9BW85 323 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 CCDC113Q9H0I3 377 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 DUSP15Q9H1R2 295 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 TOPORSQ9NS56 1045 aaPredicted RBP8.34□□□□□ -1.07
CCDC47-205ENST00000582331 OBP2AQ9NY56 170 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 SNX14Q9Y5W7 946 aa8.34□□□□□ -1.07
CCDC47-205ENST00000582331 LNP1A1A4G5 178 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 BCLAF3A2AJT9 711 aaKnown RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 KHNYNO15037 678 aaKnown RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 EDN1P05305 212 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 XBP1P17861 261 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 PSMA5P28066 241 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 GRM5P41594 1212 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 NAMPTP43490 491 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 ALDH1A3P47895 512 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 EFNA5P52803 228 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 EPHB3P54753 998 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 TNK2Q07912 1038 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 GRSF1Q12849 480 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 KARSQ15046 597 aaKnown RBP8.33□□□□□ -1.08
CCDC47-205ENST00000582331 PPP2R5AQ15172 486 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 CALCRLQ16602 461 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 XKR4Q5GH76 650 aa8.33□□□□□ -1.08
CCDC47-205ENST00000582331 TMEM196Q5HYL7 178 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms