RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RUNDC3BQ96NL0 473 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 ZNF518BQ9C0D4 1074 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 ST7Q9NRC1 585 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 CEP83Q9Y592 693 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 SCN10AQ9Y5Y9 1956 aa24.12■■□□□ 1.45
CCDC47-204ENST00000582252 POLR3GO15318 223 aaPredicted RBP24.11■■□□□ 1.45
CCDC47-204ENST00000582252 RRM1P23921 792 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 ATICP31939 592 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 CARSP49589 748 aaKnown RBP24.11■■□□□ 1.45
CCDC47-204ENST00000582252 NKX3-2P78367 333 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 ZNF667Q5HYK9 610 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 CDR2LQ86X02 465 aaPredicted RBP24.11■■□□□ 1.45
CCDC47-204ENST00000582252 NT5DC4Q86YG4 428 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 CASKIN2Q8WXE0 1202 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 KRT35Q92764 455 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 HINFPQ9BQA5 517 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 RAB17Q9H0T7 212 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 CHORDC1Q9UHD1 332 aaPredicted RBP24.11■■□□□ 1.45
CCDC47-204ENST00000582252 MTUS1Q9ULD2 1270 aa24.11■■□□□ 1.45
CCDC47-204ENST00000582252 UTP11Q9Y3A2 253 aaKnown RBP24.11■■□□□ 1.45
CCDC47-204ENST00000582252 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.11■■□□□ 1.45
CCDC47-204ENST00000582252 FRMPD3Q5JV73 1810 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 P4HA1P13674 534 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 ARF4P18085 180 aaPredicted RBP24.1■■□□□ 1.45
CCDC47-204ENST00000582252 GRK4P32298 578 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 BEX3Q00994 111 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 ZNF211Q13398 564 aaPredicted RBP24.1■■□□□ 1.45
CCDC47-204ENST00000582252 DHX34Q14147 1143 aaKnown RBP24.1■■□□□ 1.45
CCDC47-204ENST00000582252 DNAJC5GQ8N7S2 189 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 BTBD6Q96KE9 485 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 KATNAL1Q9BW62 490 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 XYLT2Q9H1B5 865 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 NFU1Q9UMS0 254 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 MROH7Q68CQ1 1323 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 NRCAMQ92823 1304 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 GOLGA6BA6NDN3 693 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 LACTBL1A8MY62 500 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 H3BQF6 201 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 INHAP05111 366 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 CALB1P05937 261 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 MYL3P08590 195 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 KRT19P08727 400 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 ITGA4P13612 1032 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 CD58P19256 250 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 PCBP1Q15365 356 aaKnown RBP eCLIP24.1■■□□□ 1.45
CCDC47-204ENST00000582252 DCAF4L1Q3SXM0 396 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 ALS2CLQ60I27 953 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 PASD1Q8IV76 773 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 CD302Q8IX05 232 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 TMEM35BQ8NCS4 154 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 PPP1R16BQ96T49 567 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 C11orf70Q9BRQ4 267 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 XPNPEP3Q9NQH7 507 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 RASAL2Q9UJF2 1139 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 PTCH2Q9Y6C5 1203 aa24.1■■□□□ 1.45
CCDC47-204ENST00000582252 TRIP12Q14669 1992 aaPredicted RBP24.09■■□□□ 1.45
CCDC47-204ENST00000582252 FAM187AA6NFU0 413 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 MED7O43513 233 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 TSPAN1O60635 241 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 HSF2BPO75031 334 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 CHRNA3P32297 505 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 TERF2Q15554 542 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 GNASQ5JWF2 1037 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 MARCH8Q5T0T0 291 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 KIAA0319LQ8IZA0 1049 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 GOLGA6L1Q8N7Z2 621 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.09■■□□□ 1.45
CCDC47-204ENST00000582252 MAIP1Q8WWC4 291 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 KAT2BQ92831 832 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 CPB2Q96IY4 423 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 GDAP1L1Q96MZ0 367 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 RUFY1Q96T51 708 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 FAM114A2Q9NRY5 505 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 PARVAQ9NVD7 372 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 AMACRQ9UHK6 382 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 PCDHGC3Q9UN70 934 aa24.09■■□□□ 1.45
CCDC47-204ENST00000582252 BHMG1C9JSJ3 638 aaPredicted RBP24.08■■□□□ 1.45
CCDC47-204ENST00000582252 PHF2O75151 1096 aa24.08■■□□□ 1.45
CCDC47-204ENST00000582252 ASPAP45381 313 aa24.08■■□□□ 1.45
CCDC47-204ENST00000582252 IRX5P78411 483 aaPredicted RBP24.08■■□□□ 1.45
CCDC47-204ENST00000582252 MFSD10Q14728 455 aa24.08■■□□□ 1.45
CCDC47-204ENST00000582252 MREGQ8N565 214 aa24.08■■□□□ 1.45
CCDC47-204ENST00000582252 ACAP3Q96P50 834 aa24.08■■□□□ 1.45
CCDC47-204ENST00000582252 GCOM2Q9BZD3 368 aaPredicted RBP24.08■■□□□ 1.45
CCDC47-204ENST00000582252 DDX20Q9UHI6 824 aaKnown RBP24.08■■□□□ 1.45
CCDC47-204ENST00000582252 ESYT3A0FGR9 886 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 ZSCAN5CA6NGD5 496 aaPredicted RBP24.07■■□□□ 1.44
CCDC47-204ENST00000582252 ADAMTS4O75173 837 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 NFICP08651 508 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 PURAQ00577 322 aaKnown RBP24.07■■□□□ 1.44
CCDC47-204ENST00000582252 HLTFQ14527 1009 aaKnown RBP eCLIP24.07■■□□□ 1.44
CCDC47-204ENST00000582252 TMEM132DQ14C87 1099 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 JADE1Q6IE81 842 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 PLEKHA7Q6IQ23 1121 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 TMEM192Q8IY95 271 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 FAM124BQ9H5Z6 455 aaPredicted RBP24.07■■□□□ 1.44
CCDC47-204ENST00000582252 VRTNQ9H8Y1 702 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 C2CD2Q9Y426 696 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 A0A1B0GUA9 196 aa24.07■■□□□ 1.44
CCDC47-204ENST00000582252 MYADML2A6NDP7 307 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms