RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 CA3P07451 260 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 MYOGP15173 224 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 PBX3P40426 434 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 BRCC3P46736 316 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 MFAP3P55082 362 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 ERVK-21P61565 698 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 APBA1Q02410 837 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 LRMPQ12912 555 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 TBX2Q13207 712 aaPredicted RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 TRIM14Q14142 442 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 LRIT3Q3SXY7 679 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 FUT10Q6P4F1 479 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 DDX53Q86TM3 631 aaKnown RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 TMEM173Q86WV6 379 aaPredicted RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 UBR7Q8N806 425 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 APPL2Q8NEU8 664 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 BCL7CQ8WUZ0 217 aaPredicted RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 KREMEN1Q96MU8 473 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 STK33Q9BYT3 514 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 UBE2TQ9NPD8 197 aaPredicted RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 FAM207AQ9NSI2 230 aaPredicted RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 NXF1Q9UBU9 619 aaKnown RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 MSRAQ9UJ68 235 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 DNAJC12Q9UKB3 198 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 DSEQ9UL01 958 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 MYO6Q9UM54 1294 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 L1RE1Q9UN81 338 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 POLIQ9UNA4 740 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 YBX2Q9Y2T7 364 aaKnown RBP12.33□□□□□ -0.44
GGA3-211ENST00000582232 CHD9Q3L8U1 2897 aa12.33□□□□□ -0.44
GGA3-211ENST00000582232 PLXNA4Q9HCM2 1894 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 GABRDO14764 452 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 ARHGEF15O94989 841 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 ODC1P11926 461 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
GGA3-211ENST00000582232 FGFR3P22607 806 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 WARSP23381 471 aaKnown RBP12.32□□□□□ -0.44
GGA3-211ENST00000582232 PBX2P40425 430 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 JAM2P57087 298 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 POLR2FP61218 127 aaKnown RBP12.32□□□□□ -0.44
GGA3-211ENST00000582232 YWHAEP62258 255 aaKnown RBP12.32□□□□□ -0.44
GGA3-211ENST00000582232 TAP1Q03518 808 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 KRT17Q04695 432 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 INCA1Q0VD86 236 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 IQCEQ6IPM2 695 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
GGA3-211ENST00000582232 RRAGAQ7L523 313 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 PDCL2Q8N4E4 241 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 HASPINQ8TF76 798 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 SHC3Q92529 594 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 ELMO3Q96BJ8 720 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
GGA3-211ENST00000582232 MMS19Q96T76 1030 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.443e-10■■■■■ 37.2
GGA3-211ENST00000582232 CHST7Q9NS84 486 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 CAPN11Q9UMQ6 739 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 CNTN6Q9UQ52 1028 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 FHOD1Q9Y613 1164 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
GGA3-211ENST00000582232 CILPO75339 1184 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 FGF18O76093 207 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 OAZ2O95190 189 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 SOD2P04179 222 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 GYPCP04921 128 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 ACO1P21399 889 aaKnown RBP12.31□□□□□ -0.44
GGA3-211ENST00000582232 LHX1P48742 406 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 UBE3AQ05086 875 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 MRPL58Q14197 206 aaKnown RBP12.31□□□□□ -0.44
GGA3-211ENST00000582232 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 USP41Q3LFD5 358 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 GJB7Q6PEY0 223 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 UNC93AQ86WB7 457 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 KLHL23Q8NBE8 558 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 KBTBD7Q8WVZ9 684 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 BAP1Q92560 729 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 KAT5Q92993 513 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 ARID3AQ99856 593 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 HERC2P3Q9BVR0 1158 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 VN1R3Q9BXE9 311 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 SDCBP2Q9H190 292 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 CISHQ9NSE2 258 aa12.31□□□□□ -0.44
GGA3-211ENST00000582232 AJAP1Q9UKB5 411 aaPredicted RBP12.31□□□□□ -0.44
GGA3-211ENST00000582232 BARX2Q9UMQ3 279 aaPredicted RBP12.31□□□□□ -0.44
GGA3-211ENST00000582232 I3L4J1 428 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 CLSTN1O94985 981 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 WEE2P0C1S8 567 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms