RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	GUCY2F	P51841	1108 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	EPHA5	P54756	1037 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ADCY1	Q08828	1119 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CYP4A22	Q5TCH4	519 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	HS2ST1	Q7LGA3	356 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	C12orf56	Q8IXR9	622 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	EFCAB13	Q8IY85	973 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	TMEM174	Q8WUU8	243 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SAAL1	Q96ER3	474 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	BORCS6	Q96GS4	357 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ZNF512	Q96ME7	567 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	IKZF4	Q9H2S9	585 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SLC2A4RG	Q9NR83	387 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	RAPGEFL1	Q9UHV5	662 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	HPSE	Q9Y251	543 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ZDHHC9	Q9Y397	364 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	MRPS23	Q9Y3D9	190 aa	Known RBP	13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708		A0A1W2PQ27	194 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708		A0A1W2PQ64	194 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708		A0A1W2PQD8	194 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CYB561D2	O14569	222 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PPEF2	O14830	753 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ACTN4	O43707	911 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PRPF40A	O75400	957 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SEC24A	O95486	1093 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	FGF19	O95750	216 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	AVPR2	P30518	371 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	HOXD13	P35453	343 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TUFM	P49411	452 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NTHL1	P78549	312 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	RBP5	P82980	135 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TFAM	Q00059	246 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	DUOXA2	Q1HG44	320 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	RNF19B	Q6ZMZ0	732 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NPAS3	Q8IXF0	933 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TMEM86A	Q8N2M4	240 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SCFD1	Q8WVM8	642 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GPR88	Q9GZN0	384 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	MFSD1	Q9H3U5	465 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	AGPAT3	Q9NRZ7	376 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GDAP2	Q9NXN4	497 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	HSPBP1	Q9NZL4	362 aa		13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.58	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TGFB1I1	O43294	461 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TMEM191B	P0C7N4	346 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PFKFB1	P16118	471 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ALDH1A3	P47895	512 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	EPHB3	P54753	998 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PTPN5	P54829	565 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	KNOP1	Q1ED39	458 aa	Known RBP	13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PRSS36	Q5K4E3	855 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ASTL	Q6HA08	431 aa	Predicted RBP	13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CENPP	Q6IPU0	288 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PDZD4	Q76G19	769 aa	Predicted RBP	13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	DPH6	Q7L8W6	267 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ITIH5	Q86UX2	942 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	WDR49	Q8IV35	697 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	DCP1B	Q8IZD4	617 aa	Known RBP	13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	C1orf127	Q8N9H9	656 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	XXYLT1	Q8NBI6	393 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ITFG1	Q8TB96	612 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PAGE5	Q96GU1	130 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CCDC34	Q96HJ3	373 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ANKRD36BP1	Q96IX9	119 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	RTP3	Q9BQQ7	232 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ZCWPW1	Q9H0M4	648 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PCIF1	Q9H4Z3	704 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	INTS13	Q9NVM9	706 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	HCFC1R1	Q9NWW0	138 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	FBXL21	Q9UKT6	434 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	AGAP1	Q9UPQ3	857 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	YIPF1	Q9Y548	306 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NUMBL	Q9Y6R0	609 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SCN1A	P35498	2009 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NOTCH4	Q99466	2003 aa		13.57	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	DOCK6	Q96HP0	2047 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CACNA1H	O95180	2353 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TSC2	P49815	1807 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	MTMR11	A4FU01	709 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GOLGA8IP	A6NC78	632 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	GOLGA8J	A6NMD2	632 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	HUS1	O60921	280 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ECI2	O75521	394 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	KIF20A	O95235	890 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TNNC2	P02585	160 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	ITGB3	P05106	788 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	FAM163B	P0C2L3	166 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SYK	P43405	635 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	AFM	P43652	599 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NUCB2	P80303	420 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PFKP	Q01813	784 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TWF1	Q12792	350 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	MYO1E	Q12965	1108 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	DUSP4	Q13115	394 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	CUL4B	Q13620	913 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	SNRNP35	Q16560	246 aa	Known RBP	13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	NFE2	Q16621	373 aa	Predicted RBP	13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	PHLDB3	Q6NSJ2	640 aa		13.56	□□□□□ -0.24
CDK5RAP3-222	ENST00000581708	TOP6BL	Q8N6T0	577 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms