RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
MKS1-210ENST00000581180 LNX1Q8TBB1 728 aaPredicted RBP16.22■□□□□ 0.19
MKS1-210ENST00000581180 AUTS2Q8WXX7 1259 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 PIK3R5Q8WYR1 880 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 CDX2Q99626 313 aaPredicted RBP16.22■□□□□ 0.19
MKS1-210ENST00000581180 PI4K2AQ9BTU6 479 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 NDST4Q9H3R1 872 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 APOBEC3GQ9HC16 384 aaKnown RBP16.22■□□□□ 0.19
MKS1-210ENST00000581180 ENTPD7Q9NQZ7 604 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 L1RE1Q9UN81 338 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 SNX9Q9Y5X1 595 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 MTCH2Q9Y6C9 303 aa16.22■□□□□ 0.19
MKS1-210ENST00000581180 GTPBP10A4D1E9 387 aaKnown RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 C2orf71A6NGG8 1288 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 HIDE1A8MVS5 230 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 TBC1D4O60343 1298 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 OAZ2O95190 189 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 CXCL14O95715 111 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 ODC1P11926 461 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 COPB1P53618 953 aaKnown RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 NOP14P78316 857 aaKnown RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 SMC1AQ14683 1233 aaKnown RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 SOWAHAQ2M3V2 549 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 WDR72Q3MJ13 1102 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 ZNF667Q5HYK9 610 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 VARS2Q5ST30 1063 aaKnown RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 KIAA1841Q6NSI8 718 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 PRSS55Q6UWB4 352 aaPredicted RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 DPH6Q7L8W6 267 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 CEP57Q86XR8 500 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 TOP6BLQ8N6T0 577 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 APPL2Q8NEU8 664 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 RIN2Q8WYP3 895 aaPredicted RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 RXFP1Q9HBX9 757 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 MRPL17Q9NRX2 175 aaKnown RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 POLIQ9UNA4 740 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 SSX2IPQ9Y2D8 614 aa16.21■□□□□ 0.19
MKS1-210ENST00000581180 TIMM13Q9Y5L4 95 aaPredicted RBP16.21■□□□□ 0.19
MKS1-210ENST00000581180 PTPRDP23468 1912 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 ARHGEF37A1IGU5 675 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 CSPG5O95196 566 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 FAM163BP0C2L3 166 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
MKS1-210ENST00000581180 BMS1Q14692 1282 aaKnown RBP16.2■□□□□ 0.18
MKS1-210ENST00000581180 WSCD1Q658N2 575 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 ANKS3Q6ZW76 656 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 EHBP1Q8NDI1 1231 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 SPATA18Q8TC71 538 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 KBTBD7Q8WVZ9 684 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 MYLIPQ8WY64 445 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 GAS2L1Q99501 681 aaPredicted RBP16.2■□□□□ 0.18
MKS1-210ENST00000581180 VPS16Q9H269 839 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 FNIP2Q9P278 1114 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 MTRRQ9UBK8 725 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
MKS1-210ENST00000581180 DSEQ9UL01 958 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 BACE2Q9Y5Z0 518 aa16.2■□□□□ 0.18
MKS1-210ENST00000581180 MYH10P35580 1976 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.19■□□□□ 0.18
MKS1-210ENST00000581180 C2CD2LO14523 706 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 GABRDO14764 452 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 HUS1O60921 280 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 ASPAP45381 313 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 TNNC1P63316 161 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 YWHAHQ04917 246 aaPredicted RBP16.19■□□□□ 0.18
MKS1-210ENST00000581180 CETN1Q12798 172 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 PSMD5Q16401 504 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 OVOS1Q6IE37 1185 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 RSPO2Q6UXX9 243 aaPredicted RBP16.19■□□□□ 0.18
MKS1-210ENST00000581180 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 OSTM1Q86WC4 334 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 TMEM86AQ8N2M4 240 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 ANKRD20A12PQ8NF67 263 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 TATDN2Q93075 761 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 FAXDC2Q96IV6 333 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 KLHL5Q96PQ7 755 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 RTP3Q9BQQ7 232 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 CLSTN3Q9BQT9 956 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 BCO2Q9BYV7 579 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 IMPG2Q9BZV3 1241 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 SDCBP2Q9H190 292 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 NSUN3Q9H649 340 aaKnown RBP16.19■□□□□ 0.18
MKS1-210ENST00000581180 SMYD3Q9H7B4 428 aa16.19■□□□□ 0.18
MKS1-210ENST00000581180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.19■□□□□ 0.18
MKS1-210ENST00000581180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.19■□□□□ 0.18
MKS1-210ENST00000581180 GOLGA6L19H0YKK7 550 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 H7C4K7 107 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 TACC1O75410 805 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 CNPP09543 421 aaKnown RBP16.18■□□□□ 0.18
MKS1-210ENST00000581180 RPL17P18621 184 aaKnown RBP16.18■□□□□ 0.18
MKS1-210ENST00000581180 WARSP23381 471 aaKnown RBP16.18■□□□□ 0.18
MKS1-210ENST00000581180 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 WDR44Q5JSH3 913 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 ZNF280DQ6N043 979 aa16.18■□□□□ 0.18
MKS1-210ENST00000581180 DPY19L2P1Q6NXN4 242 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms