RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 GUCY1B3Q02153 619 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 CCINQ13939 588 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 PDIA5Q14554 519 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 CCDC6Q16204 474 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 SEZ6Q53EL9 994 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 WDR44Q5JSH3 913 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 STXBP5Q5T5C0 1151 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 GPR158Q5T848 1215 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 CENPPQ6IPU0 288 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 DSTYKQ6XUX3 929 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 TAS1R3Q7RTX0 852 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 ITIH5Q86UX2 942 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 TMC8Q8IU68 726 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 GAB3Q8WWW8 586 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 ZBTB45Q96K62 511 aaPredicted RBP10.82□□□□□ -0.68
RFFL-208ENST00000581039 LRRC3BQ96PB8 259 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 C17orf75Q9HAS0 396 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 PLEKHA5Q9HAU0 1116 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 ANKFY1Q9P2R3 1169 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 TUBGCP4Q9UGJ1 667 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 SLC8A2Q9UPR5 921 aa10.82□□□□□ -0.68
RFFL-208ENST00000581039 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
RFFL-208ENST00000581039 TRIP11Q15643 1979 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 SDK1Q7Z5N4 2213 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 CCDC163A0A0D9SF12 145 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 E9PMD0 336 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 ABLIM1O14639 778 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 CLDN3O15551 220 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 MEFVO15553 781 aaPredicted RBP10.81□□□□□ -0.68
RFFL-208ENST00000581039 EXTL3O43909 919 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 EPN2O95208 641 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 LARGE1O95461 756 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 VNN2O95498 520 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 GABRR2P28476 465 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 HOXC13P31276 330 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 MATR3P43243 847 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFFL-208ENST00000581039 RAP1GAPP47736 663 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 PXNP49023 591 aaPredicted RBP10.81□□□□□ -0.68
RFFL-208ENST00000581039 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFFL-208ENST00000581039 ANAPC15P60006 121 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 SPAG1Q07617 926 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 TNK2Q07912 1038 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 GRSF1Q12849 480 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFFL-208ENST00000581039 NOLC1Q14978 699 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFFL-208ENST00000581039 ITPRIPL2Q3MIP1 535 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 OVOS1Q6IE37 1185 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 ARMCX5Q6P1M9 558 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 GAREM2Q75VX8 874 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 KBTBD6Q86V97 674 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 DAW1Q8N136 415 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 ATAD1Q8NBU5 361 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 SNX29Q8TEQ0 813 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 PSMG2Q969U7 264 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 NTPCRQ9BSD7 190 aaKnown RBP10.81□□□□□ -0.68
RFFL-208ENST00000581039 RAB34Q9BZG1 259 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 CRISPLD1Q9H336 500 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 TASP1Q9H6P5 420 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 RXFP3Q9NSD7 469 aa10.81□□□□□ -0.68
RFFL-208ENST00000581039 RALGAPA1Q6GYQ0 2036 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 CFAP47Q6ZTR5 3102 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 KCNK5O95279 499 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 CXCL8P10145 99 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 CYP3A5P20815 502 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 WEE1P30291 646 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 LRPAP1P30533 357 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 SMTNP53814 917 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 GNL2Q13823 731 aaKnown RBP10.8□□□□□ -0.68
RFFL-208ENST00000581039 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 TAF12Q16514 161 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 KRT79Q5XKE5 535 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 RINT1Q6NUQ1 792 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 KIF12Q96FN5 646 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 C8orf76Q96K31 380 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 MKNK1Q9BUB5 465 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 RUSC1Q9BVN2 902 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 LSM14BQ9BX40 385 aaKnown RBP10.8□□□□□ -0.68
RFFL-208ENST00000581039 FOXP1Q9H334 677 aaPredicted RBP10.8□□□□□ -0.68
RFFL-208ENST00000581039 VPS45Q9NRW7 570 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 HSFX1Q9UBD0 423 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 UBQLN1Q9UMX0 589 aaKnown RBP10.8□□□□□ -0.68
RFFL-208ENST00000581039 PCDHGA5Q9Y5G8 931 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 COL4A2P08572 1712 aa10.8□□□□□ -0.68
RFFL-208ENST00000581039 MTMR11A4FU01 709 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 XPOTO43592 962 aaKnown RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 SOAT2O75908 522 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 AKAP3O75969 853 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 PROS1P07225 676 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 CLTAP09496 248 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 TYMPP19971 482 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 CDC25CP30307 473 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 MPLP40238 635 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms