RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CMASQ8NFW8 434 aaPredicted RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 FEZF2Q8TBJ5 459 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 HDAC7Q8WUI4 952 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 C18orf25Q96B23 403 aaPredicted RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 FAM212AQ96EL1 285 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 BORCS6Q96GS4 357 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 ANKRD36BP1Q96IX9 119 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 FNBP1Q96RU3 617 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CGRRF1Q99675 332 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 DUSP9Q99956 384 aaKnown RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 TTPALQ9BTX7 342 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 METTL14Q9HCE5 456 aaKnown RBP10.67□□□□□ -0.7
GGA3-209ENST00000580646 PDE11AQ9HCR9 933 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 MAN1C1Q9NR34 630 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 INTS13Q9NVM9 706 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 DPP3Q9NY33 737 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 DPP7Q9UHL4 492 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 ITGA11Q9UKX5 1188 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CTNND2Q9UQB3 1225 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
GGA3-209ENST00000580646 CACNA1AO00555 2505 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 C5orf42Q9H799 3197 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 CCDC195A0A1B0GUA6 201 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 C2CD4DB7Z1M9 353 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 PIRO00625 290 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 TGM5O43548 720 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 TRAPPC3O43617 180 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 B3GAT3O94766 335 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 TMEM191BP0C7N4 346 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 SPATA31D3P0C874 917 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 RPL17P18621 184 aaKnown RBP10.66□□□□□ -0.7
GGA3-209ENST00000580646 IGFBP6P24592 240 aaPredicted RBP10.66□□□□□ -0.7
GGA3-209ENST00000580646 GTF2H1P32780 548 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 PNPLA4P41247 253 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 AARSP49588 968 aaKnown RBP eCLIP10.66□□□□□ -0.7
GGA3-209ENST00000580646 ZXDAP98168 799 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 CREMQ03060 361 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 BFSP1Q12934 665 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 DUOXA2Q1HG44 320 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 KLHL10Q6JEL2 608 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 LILRA6Q6PI73 481 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 C15orf39Q6ZRI6 1047 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 SPATA31D4Q6ZUB0 917 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 FRMD5Q7Z6J6 570 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 GLYCTKQ8IVS8 523 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 CSGALNACT2Q8N6G5 542 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 LRRC52Q8N7C0 313 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 LNX1Q8TBB1 728 aaPredicted RBP10.66□□□□□ -0.7
GGA3-209ENST00000580646 NOC3LQ8WTT2 800 aaKnown RBP10.66□□□□□ -0.7
GGA3-209ENST00000580646 PIK3R5Q8WYR1 880 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 GZF1Q9H116 711 aaPredicted RBP10.66□□□□□ -0.7
GGA3-209ENST00000580646 PLEKHA4Q9H4M7 779 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 GOLGA2P5Q9HBQ8 144 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
GGA3-209ENST00000580646 ARHGEF37A1IGU5 675 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 LRRIQ3A6PVS8 624 aaPredicted RBP10.65□□□□□ -0.7
GGA3-209ENST00000580646 SYN3O14994 580 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 STX10O60499 249 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 RFPL2O75678 378 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
GGA3-209ENST00000580646 TNNC2P02585 160 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 KRT13P13646 458 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 TNNI1P19237 187 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 FGFR3P22607 806 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 MRE11P49959 708 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 VAMP7P51809 220 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 TFAMQ00059 246 aaKnown RBP10.65□□□□□ -0.7
GGA3-209ENST00000580646 SPAG1Q07617 926 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 PSMD5Q16401 504 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 PTPN21Q16825 1174 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 C9orf57Q5W0N0 161 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 PDXDC1Q6P996 788 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 CD300LGQ6UXG3 332 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 CYP26C1Q6V0L0 522 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.65□□□□□ -0.7
GGA3-209ENST00000580646 CCDC149Q6ZUS6 474 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 ZDHHC14Q8IZN3 488 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 PLCD3Q8N3E9 789 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 C1orf127Q8N9H9 656 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 TDRD5Q8NAT2 981 aaKnown RBP10.65□□□□□ -0.7
GGA3-209ENST00000580646 KREMEN2Q8NCW0 462 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 C3orf58Q8NDZ4 430 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 CXorf38Q8TB03 319 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 ENOX1Q8TC92 643 aaKnown RBP10.65□□□□□ -0.7
GGA3-209ENST00000580646 PLEKHO2Q8TD55 490 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 ZNF560Q96MR9 790 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 CLSTN3Q9BQT9 956 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 RHOBTB2Q9BYZ6 727 aa10.65□□□□□ -0.7
GGA3-209ENST00000580646 PTPRJQ12913 1337 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 TMEM221A6NGB7 291 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 M0QZQ0 153 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 M0R296 226 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 PMM2O15305 246 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 PAPLNO95428 1278 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 CAVIN2O95810 425 aa10.64□□□□□ -0.71
GGA3-209ENST00000580646 ITGB3P05106 788 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms