RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TACC1O75410 805 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 CREMQ03060 361 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 TAP1Q03518 808 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 LRMPQ12912 555 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 TRIM14Q14142 442 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 KLHDC7AQ5VTJ3 777 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 FAM171A1Q5VUB5 890 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 ANKS3Q6ZW76 656 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 CACNA2D4Q7Z3S7 1137 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 KLHL23Q8NBE8 558 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 HASPINQ8TF76 798 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 MRFAP1L1Q96HT8 127 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 TTPALQ9BTX7 342 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 LSM14BQ9BX40 385 aaKnown RBP15.3■□□□□ 0.04
SKA2-205ENST00000580541 SNX25Q9H3E2 840 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 CACNG4Q9UBN1 327 aa15.3■□□□□ 0.04
SKA2-205ENST00000580541 YBX2Q9Y2T7 364 aaKnown RBP15.3■□□□□ 0.04
SKA2-205ENST00000580541 ITIH6Q6UXX5 1313 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 FSD2A1L4K1 749 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 PPEF2O14830 753 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 SPTLC1O15269 473 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 SOD2P04179 222 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 CYP11A1P05108 521 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 GNL1P36915 607 aaPredicted RBP15.29■□□□□ 0.04
SKA2-205ENST00000580541 PBX2P40425 430 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 PBX3P40426 434 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 BRCC3P46736 316 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
SKA2-205ENST00000580541 CUL2Q13617 745 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 SPECC1LQ69YQ0 1117 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 PPFIBP1Q86W92 1011 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 CEP57Q86XR8 500 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 C3orf58Q8NDZ4 430 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 TATDN2Q93075 761 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 NUCKS1Q9H1E3 243 aaKnown RBP15.29■□□□□ 0.04
SKA2-205ENST00000580541 FAM207AQ9NSI2 230 aaPredicted RBP15.29■□□□□ 0.04
SKA2-205ENST00000580541 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 HCSTQ9UBK5 93 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 SIK3Q9Y2K2 1263 aa15.29■□□□□ 0.04
SKA2-205ENST00000580541 TNRC18O15417 2968 aaPredicted RBP15.29■□□□□ 0.04
SKA2-205ENST00000580541 H3BNC9 293 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 URODP06132 367 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 UCHL3P15374 230 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 FGFR3P22607 806 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 PCSK1P29120 753 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 ZNF75DP51815 510 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 GPM6BQ13491 265 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 SOWAHAQ2M3V2 549 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
SKA2-205ENST00000580541 FIGNQ5HY92 759 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 OVOS1Q6IE37 1185 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 SPOPLQ6IQ16 392 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 CD300LGQ6UXG3 332 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 UNC93AQ86WB7 457 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 DRC7Q8IY82 874 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 ADGRF2Q8IZF7 708 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 VPS52Q8N1B4 723 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 OR6B3Q8NGW1 331 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 TNIP3Q96KP6 325 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 SPAG5Q96R06 1193 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 C17orf80Q9BSJ5 609 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 BCO2Q9BYV7 579 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 GPR62Q9BZJ7 368 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 LMAN2LQ9H0V9 348 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 APOBEC3GQ9HC16 384 aaKnown RBP15.28■□□□□ 0.04
SKA2-205ENST00000580541 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
SKA2-205ENST00000580541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.047e-8■■■■■ 186.3
SKA2-205ENST00000580541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.28■□□□□ 0.04
SKA2-205ENST00000580541 MRPL17Q9NRX2 175 aaKnown RBP15.28■□□□□ 0.04
SKA2-205ENST00000580541 CEP72Q9P209 647 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
SKA2-205ENST00000580541 OAZ2O95190 189 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 ITGB1P05556 798 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 LINC00271P0C7V0 271 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 WARSP23381 471 aaKnown RBP15.27■□□□□ 0.04
SKA2-205ENST00000580541 GLUD2P49448 558 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 BPIFB4P59827 614 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 POLR2FP61218 127 aaKnown RBP15.27■□□□□ 0.04
SKA2-205ENST00000580541 PTPROQ16827 1216 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 WSCD1Q658N2 575 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 RRAGAQ7L523 313 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 TMC7Q7Z402 723 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 LIMS2Q7Z4I7 341 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.27■□□□□ 0.04
SKA2-205ENST00000580541 PDCL2Q8N4E4 241 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 SPPL3Q8TCT6 385 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 HERC2P3Q9BVR0 1158 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 CHST7Q9NS84 486 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 MTUS1Q9ULD2 1270 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 MYO6Q9UM54 1294 aa15.27■□□□□ 0.04
SKA2-205ENST00000580541 BARX2Q9UMQ3 279 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms