RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 PPP6R2O75170 966 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 CPB1P15086 417 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 RFX1P22670 979 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 ADSSP30520 456 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 PNPLA4P41247 253 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 RPS9P46781 194 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 DHX8Q14562 1220 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 ZBTB41Q5SVQ8 909 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 CENPPQ6IPU0 288 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 CRELD2Q6UXH1 353 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 RNF19BQ6ZMZ0 732 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 SMARCD2Q92925 531 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 NKD2Q969F2 451 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 MSANTD3Q96H12 275 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 SENP8Q96LD8 212 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 ACCSQ96QU6 501 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 CORO1BQ9BR76 489 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 TMEM206Q9H813 350 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 CEP72Q9P209 647 aa15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 MRPS17Q9Y2R5 130 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-216ENST00000580419 PATJQ8NI35 1801 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 DENND4CQ5VZ89 1909 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 MYMKA6NI61 221 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 ANKRD63C9JTQ0 380 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 MAN2B1O00754 1011 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 NCAM2O15394 837 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 FCARP24071 287 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 TAF6P49848 677 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 EPHB3P54753 998 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 TWF1Q12792 350 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 ZC2HC1CQ53FD0 456 aaPredicted RBP15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 ATL3Q6DD88 541 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 ZC3H14Q6PJT7 736 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 LINC00301Q8NCQ3 95 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 IRF7Q92985 503 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 USP28Q96RU2 1077 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 LRRC3Q9BY71 257 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 TNMDQ9H2S6 317 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 MRPL44Q9H9J2 332 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 OBP2AQ9NY56 170 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 FBXO4Q9UKT5 387 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 YIPF1Q9Y548 306 aa15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 NUP210Q8TEM1 1887 aaPredicted RBP15.69■□□□□ 0.1
SMARCE1-216ENST00000580419 STK25O00506 426 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 MOSPD3O75425 235 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 VNN2O95498 520 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 YEATS4O95619 227 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 CEBPBP17676 345 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 PSMC3P17980 439 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 CCR2P41597 374 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 STAT6P42226 847 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 ACOT2P49753 483 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 ARPP19P56211 112 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 FAM78AQ5JUQ0 283 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 STXBP4Q6ZWJ1 553 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 ITIH5Q86UX2 942 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 BRSK2Q8IWQ3 736 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 POMGNT1Q8WZA1 660 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 PSMG2Q969U7 264 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 BCO2Q9BYV7 579 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 ZCWPW1Q9H0M4 648 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 MAGEF1Q9HAY2 307 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 FAM86C1Q9NVL1 165 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 DPP3Q9NY33 737 aa15.68■□□□□ 0.1
SMARCE1-216ENST00000580419 MTMR11A4FU01 709 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 SPTLC1O15269 473 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 NFICP08651 508 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 ALDH1A3P47895 512 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 SNRPFP62306 86 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 AMPD3Q01432 767 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 SPAG1Q07617 926 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 DUSP4Q13115 394 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 SV2CQ496J9 727 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 TANGO2Q6ICL3 276 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 ZNF852Q6ZMS4 543 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 TMC8Q8IU68 726 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 MFSD6LQ8IWD5 586 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 THEM5Q8N1Q8 247 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 LRRC52Q8N7C0 313 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 CACTINQ8WUQ7 758 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 MCRS1Q96EZ8 462 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 ZNF560Q96MR9 790 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 KXD1Q9BQD3 176 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 LTB4R2Q9NPC1 389 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 COL4A2P08572 1712 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
SMARCE1-216ENST00000580419 FCHO2Q0JRZ9 810 aa15.66■□□□□ 0.1
SMARCE1-216ENST00000580419 SNW1Q13573 536 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms