RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 KRT37O76014 449 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 CSTBP04080 98 aaKnown RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 DHRS4L1P0CG22 281 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 KRT10P13645 584 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 MTHFD2P13995 350 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 AGXTP21549 392 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 C5AR1P21730 350 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 NR4A1P22736 598 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ELF1P32519 619 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 KRT9P35527 623 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 MRE11P49959 708 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 MEOX1P50221 254 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 CASP5P51878 434 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 AGFG1P52594 562 aaKnown RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 MAPK10P53779 464 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 SLC16A1P53985 500 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 CLNS1AP54105 237 aaKnown RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ARL4CP56559 192 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 LACTBP83111 547 aaPredicted RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 KIF23Q02241 960 aaPredicted RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ALDH6A1Q02252 535 aaKnown RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TUSC3Q13454 348 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 RIN1Q13671 783 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 STARD3Q14849 445 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 CNN3Q15417 329 aaKnown RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TAF11Q15544 211 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 UAP1L1Q3KQV9 507 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TIGD2Q4W5G0 525 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 SPECC1Q5M775 1068 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 C1QTNF12Q5T7M4 302 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 SPATA1Q5VX52 437 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 CREB3L3Q68CJ9 461 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 DAAM2Q86T65 1068 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TBC1D1Q86TI0 1168 aaPredicted RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TTC30BQ8N4P2 665 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ZNF527Q8NB42 609 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 RCBTB1Q8NDN9 531 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 SLC30A5Q8TAD4 765 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TRAPPC12Q8WVT3 735 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 BRI3BPQ8WY22 251 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 TMEM41AQ96HV5 264 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 NELL2Q99435 816 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 LRRC27Q9C0I9 530 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 BTBD1Q9H0C5 482 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 PCIF1Q9H4Z3 704 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ALG13Q9NP73 1137 aaKnown RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 DMRT3Q9NQL9 472 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ZNF277Q9NRM2 450 aaPredicted RBP3.62□□□□□ -1.83
KPNB1-208ENST00000580019 BLOC1S4Q9NUP1 217 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 ARHGAP28Q9P2N2 729 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 PCDHA2Q9Y5H9 948 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 SNX13Q9Y5W8 968 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 SRCAPQ6ZRS2 3230 aa3.62□□□□□ -1.83
KPNB1-208ENST00000580019 A0A1W2PRX2 142 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 SERINC4A6NH21 518 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 AREL1O15033 823 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 IRAK2O43187 625 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 KDM1AO60341 852 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 TMCC2O75069 709 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 SKAP2O75563 359 aaPredicted RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 DDX58O95786 925 aaKnown RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 THP07101 528 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 SLC9A1P19634 815 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 ENPP1P22413 925 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 RPS6KB1P23443 525 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 CD40P25942 277 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 HTR1BP28222 390 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 STT3AP46977 705 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 PTH2RP49190 550 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 MTNR1BP49286 362 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 SLC5A3P53794 718 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 CYP4F3Q08477 520 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 EIF4HQ15056 248 aaKnown RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 PDCD1Q15116 288 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 ARMC3Q5W041 872 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 ITPRIPL1Q6GPH6 555 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 EP400NLQ6ZTU2 488 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 RFX8Q6ZV50 586 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 MAEAQ7L5Y9 396 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 CISD2Q8N5K1 135 aaKnown RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 MSL3Q8N5Y2 521 aaKnown RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 KIAA1958Q8N8K9 716 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 TGFBRAP1Q8WUH2 860 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 KIAA1191Q96A73 305 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 COA7Q96BR5 231 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 ZC3H10Q96K80 434 aaKnown RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 ELF4Q99607 663 aaPredicted RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 NUDT16L1Q9BRJ7 211 aaKnown RBP3.61□□□□□ -1.83
KPNB1-208ENST00000580019 IPPKQ9H8X2 491 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 ACSS2Q9NR19 701 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 SLC13A4Q9UKG4 626 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 CEP83Q9Y592 693 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 NUB1Q9Y5A7 615 aa3.61□□□□□ -1.83
KPNB1-208ENST00000580019 CEP170Q5SW79 1584 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 EYA2O00167 538 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 EIF3FO00303 357 aaPredicted RBP3.6□□□□□ -1.83
KPNB1-208ENST00000580019 ARNTLO00327 626 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 TRIM38O00635 465 aa3.6□□□□□ -1.83
KPNB1-208ENST00000580019 KPNA5O15131 536 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms