RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ZNF668Q96K58 619 aaPredicted RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 FAM167AQ96KS9 214 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 FAM193BQ96PV7 902 aaPredicted RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 USP28Q96RU2 1077 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 CCDC94Q9BW85 323 aaPredicted RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 APOL6Q9BWW8 343 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 TEKT3Q9BXF9 490 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 RBCK1Q9BYM8 510 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 ARRDC1-AS1Q9H2J1 176 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 TTC12Q9H892 705 aaPredicted RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 METTL14Q9HCE5 456 aaKnown RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 SRA1Q9HD15 236 aaKnown RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 DISC1Q9NRI5 854 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 MAP10Q9P2G4 905 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 EVLQ9UI08 416 aaPredicted RBP3.73□□□□□ -1.81
CDH19-204ENST00000579658 PRDM4Q9UKN5 801 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 SAMM50Q9Y512 469 aa3.73□□□□□ -1.81
CDH19-204ENST00000579658 ZBTB42B2RXF5 422 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CHURC1-FNTBB4DL54 471 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 J3QKU1 62 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 NRG2O14511 850 aaPredicted RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 BACH1O14867 736 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 ZC3H11AO75152 810 aaKnown RBP eCLIP3.72□□□□□ -1.81
CDH19-204ENST00000579658 MED24O75448 989 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 RPP40O75818 363 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 ALDH2P05091 517 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CCDC192P0DO97 292 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PLA2G2AP14555 144 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PDCP20941 246 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 KLRC1P26715 233 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 MARCKSP29966 332 aaPredicted RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 MAPK8P45983 427 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 FNTBP49356 437 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 NPEPPSP55786 919 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 RNASELQ05823 741 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 PTPAQ15257 358 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CALCRLQ16602 461 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PLA2G4FQ68DD2 849 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 TSSK4Q6SA08 328 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 USP49Q70CQ1 688 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 RABEPKQ7Z6M1 372 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 FILIP1Q7Z7B0 1213 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 SCUBE3Q8IX30 993 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 RNF168Q8IYW5 571 aaPredicted RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 KIAA0319LQ8IZA0 1049 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CAMKK1Q8N5S9 505 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 TPCN2Q8NHX9 752 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 LRRC15Q8TF66 581 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 FAM3CQ92520 227 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CLIC6Q96NY7 704 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PPP1R16BQ96T49 567 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PLIN2Q99541 437 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 RIT2Q99578 217 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CCDC86Q9H6F5 360 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 NRDE2Q9H7Z3 1164 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 LMAN1LQ9HAT1 526 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 ZNF302Q9NR11 478 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 TBC1D22BQ9NU19 505 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 MTF2Q9Y483 593 aaPredicted RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 PCDHA10Q9Y5I2 948 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 TSC2P49815 1807 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 K7ESF4 209 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 KHNYNO15037 678 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 ARHGAP6O43182 974 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CTIFO43310 598 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 GAS2O43903 313 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 SLITRK3O94933 977 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CAPNS1P04632 268 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 OR52Z1P0C646 297 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 SPATA31C1P0DKV0 1188 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 GCFC2P16383 781 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 SFPQP23246 707 aaKnown RBP eCLIP3.72□□□□□ -1.81
CDH19-204ENST00000579658 EIF4BP23588 611 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 WEE1P30291 646 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PHKA2P46019 1235 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 SLC11A1P49279 550 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 GYS2P54840 703 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 TMEM62Q0P6H9 643 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PPP2R5CQ13362 524 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 DRP2Q13474 957 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 SF3A2Q15428 464 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 LPAL2Q16609 132 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 TMEM266Q2M3C6 531 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 COL28A1Q2UY09 1125 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 KANK3Q6NY19 840 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 MIS18BP1Q6P0N0 1132 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PARM1Q6UWI2 310 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 KCNK18Q7Z418 384 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 ZNF605Q86T29 641 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 LEMD2Q8NC56 503 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CCDC26Q8TAB7 109 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 PIGOQ8TEQ8 1089 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 FGF14Q92915 247 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 FAM20AQ96MK3 541 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 CEP89Q96ST8 783 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 EIF2AK1Q9BQI3 630 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 MMTAG2Q9BU76 263 aaKnown RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 COLEC11Q9BWP8 271 aa3.72□□□□□ -1.81
CDH19-204ENST00000579658 SCAND2PQ9GZW5 306 aaPredicted RBP3.72□□□□□ -1.81
CDH19-204ENST00000579658 SAP130Q9H0E3 1048 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms