RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 C1orf127Q8N9H9 656 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 FAM200AQ8TCP9 573 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 SMARCE1Q969G3 411 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 HPDLQ96IR7 371 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 PGLYRP2Q96PD5 576 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 CORO1BQ9BR76 489 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 GTPBP4Q9BZE4 634 aaKnown RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 MTMR12Q9C0I1 747 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 WDR6Q9NNW5 1121 aaKnown RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 INTS13Q9NVM9 706 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 AFF4Q9UHB7 1163 aaKnown RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 FBXW11Q9UKB1 542 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 MAFFQ9ULX9 164 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 MRPS23Q9Y3D9 190 aaKnown RBP7.06□□□□□ -1.28
TRAF4-213ENST00000578917 SNX9Q9Y5X1 595 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 C5orf42Q9H799 3197 aa7.06□□□□□ -1.28
TRAF4-213ENST00000578917 CLUHO75153 1309 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 TRIOO75962 3097 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 NLRC5Q86WI3 1866 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 WDR27A2RRH5 827 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 FAM86C2PA6NEL3 165 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 STK25O00506 426 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 ZNF197O14709 1029 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 ABLIM3O94929 683 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 RHOBTB3O94955 611 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 NR3C1P04150 777 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 OR4Q2P0C623 313 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 KRT13P13646 458 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 AP3M2P53677 418 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 EPHB3P54753 998 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 MYL7Q01449 175 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 TSPY1Q01534 308 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 CYP24A1Q07973 514 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 EHHADHQ08426 723 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 DUSP4Q13115 394 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 GPR17Q13304 367 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 PLD1Q13393 1074 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 ADAM9Q13443 819 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 STIM1Q13586 685 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 MTMR3Q13615 1198 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 MYBPC2Q14324 1141 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 KCNB1Q14721 858 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 PSMD6Q15008 389 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 PABPC1LQ4VXU2 614 aaKnown RBP7.05□□□□□ -1.28
TRAF4-213ENST00000578917 SLC39A12Q504Y0 691 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 ISM2Q6H9L7 571 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 RNF19BQ6ZMZ0 732 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 TRAPPC11Q7Z392 1133 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 EFCAB13Q8IY85 973 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 TCEAL8Q8IYN2 117 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 DCP1BQ8IZD4 617 aaKnown RBP7.05□□□□□ -1.28
TRAF4-213ENST00000578917 ZDHHC14Q8IZN3 488 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 LRRC52Q8N7C0 313 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 KIAA0895Q8NCT3 520 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 OR5B17Q8NGF7 314 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 EDAQ92838 391 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.28
TRAF4-213ENST00000578917 ZNF707Q96C28 371 aaPredicted RBP7.05□□□□□ -1.28
TRAF4-213ENST00000578917 FAM84AQ96KN4 292 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 GSDMAQ96QA5 445 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 SEPT5Q99719 369 aaPredicted RBP7.05□□□□□ -1.28
TRAF4-213ENST00000578917 TSG101Q99816 390 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 SNX25Q9H3E2 840 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 SLC27A5Q9Y2P5 690 aa7.05□□□□□ -1.28
TRAF4-213ENST00000578917 CETN3O15182 167 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TBC1D4O60343 1298 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 GADD45BO75293 160 aaPredicted RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 SEC24AO95486 1093 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 CYP11A1P05108 521 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ASGR2P07307 311 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 MYL4P12829 197 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 LAMP2P13473 410 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 P4HA1P13674 534 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 RFX1P22670 979 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 NR2F2P24468 414 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PCSK1P29120 753 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 HOXA9P31269 272 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PSMC2P35998 433 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 LHX1P48742 406 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TUFMP49411 452 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 AARSP49588 968 aaKnown RBP eCLIP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 WNT7BP56706 349 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TNNC1P63316 161 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 NTHL1P78549 312 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 ZXDAP98168 799 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TWF1Q12792 350 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 SMARCB1Q12824 385 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 VEPH1Q14D04 833 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 WDR72Q3MJ13 1102 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 MGAT5BQ3V5L5 792 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 TRIM67Q6ZTA4 783 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
TRAF4-213ENST00000578917 C12orf56Q8IXR9 622 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 UBALD2Q8IYN6 164 aa7.04□□□□□ -1.28
TRAF4-213ENST00000578917 SMYD4Q8IYR2 804 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms