RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 LAMP2P13473 410 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 TBXAS1P24557 533 aaPredicted RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 GABRB3P28472 473 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 NOS3P29474 1203 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 ACSL1P33121 698 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 KRT2P35908 639 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 ARL3P36405 182 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 CCT4P50991 539 aaKnown RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 PNLIPRP1P54315 467 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 RBP5P82980 135 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 STK4Q13043 487 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 DUSP28Q4G0W2 176 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 C3orf38Q5JPI3 329 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 C1orf141Q5JVX7 400 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 ATPAF1Q5TC12 328 aaPredicted RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 CPZQ66K79 652 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 MBLAC2Q68D91 279 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 FAM47EQ6ZV65 393 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 KANSL1Q7Z3B3 1105 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 GALNT7Q86SF2 657 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 KRT73Q86Y46 540 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 SMYD4Q8IYR2 804 aaPredicted RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 NUP93Q8N1F7 819 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 Q8N1Y9 231 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 TMEM151AQ8N4L1 468 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 TMEM57Q8N5G2 664 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 GDAP1Q8TB36 358 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 PIGOQ8TEQ8 1089 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 WFDC12Q8WWY7 111 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 USP6NLQ92738 828 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 DPF2Q92785 391 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 TRIM43Q96BQ3 446 aaPredicted RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 RNF125Q96EQ8 232 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 CALML4Q96GE6 196 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 SNX27Q96L92 541 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 SAMD11Q96NU1 681 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 DMRTA2Q96SC8 542 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 ANP32EQ9BTT0 268 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 HGH1Q9BTY7 390 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 MXD3Q9BW11 206 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 SSBP4Q9BWG4 385 aaPredicted RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 TRIM54Q9BYV2 358 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 MAGEB5Q9BZ81 275 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 OSBPL6Q9BZF3 934 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 POFUT1Q9H488 388 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 PRDM8Q9NQV8 689 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 SACM1LQ9NTJ5 587 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 CALCOCO1Q9P1Z2 691 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 DSEQ9UL01 958 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 PCDHGB4Q9UN71 923 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 RRP15Q9Y3B9 282 aaKnown RBP4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 PCDHA13Q9Y5I0 950 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 CDY2AQ9Y6F7 541 aa4.71□□□□□ -1.66
GAPLINC-201ENST00000578664 DIP2BQ9P265 1576 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ABCC10Q5T3U5 1492 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ST20-MTHFSA0A0A6YYL1 179 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 C7orf72A4D263 438 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 GOLGA6L22H0YM25 854 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 MEIS1O00470 390 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 KCNQ3O43525 872 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 SRGAP2O75044 1071 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 SLC22A3O75751 556 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ACTL6BO94805 426 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ENDOD1O94919 500 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ALX3O95076 343 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 CSPG5O95196 566 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 TIAF1O95411 115 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ANXA1P04083 346 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 HNRNPA1P09651 372 aaKnown RBP eCLIP4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 FTH1P19P0C7X4 201 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 COL6A2P12110 1019 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 JUPP14923 745 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 RPS2P15880 293 aaKnown RBP4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 IFNAR1P17181 557 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 EEF1DP29692 281 aaKnown RBP4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 RGS2P41220 211 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 GPR15P49685 360 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 MCM2P49736 904 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 CSE1LP55060 971 aaKnown RBP4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 SESN2P58004 480 aaPredicted RBP4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 AP2B1P63010 937 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 DLG4P78352 724 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 MC1RQ01726 317 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 PPARDQ03181 441 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ADCY2Q08462 1091 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 AP1B1Q10567 949 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 PRPF4BQ13523 1007 aaKnown RBP4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 MYBPC3Q14896 1274 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 TNIP1Q15025 636 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 ANKRD1Q15327 319 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 CHRNA2Q15822 529 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 CCDC178Q5BJE1 867 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 TCP11X2Q5H9J9 407 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 KHDC1LQ5JSQ8 128 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 TTC38Q5R3I4 469 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 TRIM68Q6AZZ1 485 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 MFSD5Q6N075 450 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 KIAA1841Q6NSI8 718 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 IYDQ6PHW0 289 aa4.7□□□□□ -1.66
GAPLINC-201ENST00000578664 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms