RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 CLSTN1O94985 981 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 P4HA1P13674 534 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 RPL17P18621 184 aaKnown RBP12.39□□□□□ -0.43
ERBB2-208ENST00000578630 KCNA5P22460 613 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 ELF1P32519 619 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 GCLMP48507 274 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 LHX1P48742 406 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 CLCN4P51793 760 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 CETN1Q12798 172 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 NCOA4Q13772 614 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 PUS10Q3MIT2 529 aaKnown RBP12.39□□□□□ -0.43
ERBB2-208ENST00000578630 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 KRT39Q6A163 491 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 GLYCTKQ8IVS8 523 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 ZNF461Q8TAF7 563 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 SPATA18Q8TC71 538 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
ERBB2-208ENST00000578630 TAF4BQ92750 862 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 MMS19Q96T76 1030 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 IMPG2Q9BZV3 1241 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
ERBB2-208ENST00000578630 PLEKHA4Q9H4M7 779 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 DZANK1Q9NVP4 752 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 TMEM63CQ9P1W3 806 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 CDY1Q9Y6F8 540 aa12.39□□□□□ -0.43
ERBB2-208ENST00000578630 LINC01565O15544 149 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 TGM5O43548 720 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 TBC1D4O60343 1298 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 SLC34A2O95436 690 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
ERBB2-208ENST00000578630 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 ARPP19P56211 112 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 MYL6P60660 151 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 TNNC1P63316 161 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 MRPS5P82675 430 aaKnown RBP12.38□□□□□ -0.43
ERBB2-208ENST00000578630 MYL7Q01449 175 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 PPP3CAQ08209 521 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 KCNC3Q14003 757 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 STX1AQ16623 288 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 UVSSAQ2YD98 709 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 ZNF699Q32M78 642 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 LEXMQ3ZCV2 418 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 DCAF17Q5H9S7 520 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-208ENST00000578630 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 C1orf220Q5T0J3 134 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 TDRD10Q5VZ19 366 aaKnown RBP12.38□□□□□ -0.43
ERBB2-208ENST00000578630 WSCD1Q658N2 575 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 CES5AQ6NT32 575 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 ANKRD54Q6NXT1 300 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 LILRA6Q6PI73 481 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 RTL10Q7L3V2 364 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 FAM114A1Q8IWE2 563 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 FAM84AQ96KN4 292 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
ERBB2-208ENST00000578630 MAGEC2Q9UBF1 373 aaPredicted RBP12.38□□□□□ -0.43
ERBB2-208ENST00000578630 FBXL5Q9UKA1 691 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 MAFFQ9ULX9 164 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 CDH23Q9H251 3354 aa12.38□□□□□ -0.43
ERBB2-208ENST00000578630 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 N4BP1O75113 896 aaKnown RBP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 HLA-DRAP01903 254 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 CPB1P15086 417 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 EPCAMP16422 314 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 LTBRP36941 435 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 MXI1P50539 228 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 WDR44Q5JSH3 913 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 TPGS2Q68CL5 300 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 C15orf39Q6ZRI6 1047 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 CCDC149Q6ZUS6 474 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 PDCL2Q8N4E4 241 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 KREMEN2Q8NCW0 462 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 ENOX1Q8TC92 643 aaKnown RBP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 THAP9Q9H5L6 903 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 CLEC1BQ9P126 229 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 CD207Q9UJ71 328 aa12.37□□□□□ -0.43
ERBB2-208ENST00000578630 BARX2Q9UMQ3 279 aaPredicted RBP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
ERBB2-208ENST00000578630 ADAM12O43184 909 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 ABLIM3O94929 683 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 VNN1O95497 513 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 GLP2RO95838 553 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 SPATA31D3P0C874 917 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 ATF2P15336 505 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 PCSK1P29120 753 aa12.36□□□□□ -0.43
ERBB2-208ENST00000578630 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
ERBB2-208ENST00000578630 TSPY1Q01534 308 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms