RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 SCN10AQ9Y5Y9 1956 aa18.1■□□□□ 0.49
SREBF1-218ENST00000578469 GRID2IPA4D2P6 1211 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 MOXD2PA6NHM9 499 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 XPOTO43592 962 aaKnown RBP18.09■□□□□ 0.49
SREBF1-218ENST00000578469 ITGB8P26012 769 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 CLEC16AQ2KHT3 1053 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 ANKRD33Q7Z3H0 272 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 PALB2Q86YC2 1186 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 UBR7Q8N806 425 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 BEST2Q8NFU1 509 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 TPCN2Q8NHX9 752 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 TRIM11Q96F44 468 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 SNX27Q96L92 541 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 EIF2AQ9BY44 585 aaKnown RBP18.09■□□□□ 0.49
SREBF1-218ENST00000578469 VRTNQ9H8Y1 702 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 CYP3A43Q9HB55 503 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 ACP6Q9NPH0 428 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 CISHQ9NSE2 258 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 NXF1Q9UBU9 619 aaKnown RBP18.09■□□□□ 0.49
SREBF1-218ENST00000578469 SIX4Q9UIU6 781 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 AGAP1Q9UPQ3 857 aa18.09■□□□□ 0.49
SREBF1-218ENST00000578469 ANK1P16157 1881 aa18.08■□□□□ 0.49
SREBF1-218ENST00000578469 CTAGE15A4D2H0 777 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 MEFVO15553 781 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-218ENST00000578469 THAP12O43422 761 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 TADA3O75528 432 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 RPS6KA5O75582 802 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 STAU1O95793 577 aaKnown RBP18.08■□□□□ 0.48
SREBF1-218ENST00000578469 CTAGE8P0CG41 777 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 POLR2BP30876 1174 aaKnown RBP18.08■□□□□ 0.48
SREBF1-218ENST00000578469 EPHB4P54760 987 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 TCEAL1Q15170 157 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 PTGISQ16647 500 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 CTAGE6Q86UF2 777 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 FAM228AQ86W67 206 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 DNAAF5Q86Y56 855 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 CTAGE4Q8IX94 777 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 HACE1Q8IYU2 909 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 TTC39CQ8N584 583 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 SLC35G2Q8TBE7 412 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 CAGE1Q8TC20 777 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 UBE2Q2Q8WVN8 375 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 GOLGA1Q92805 767 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 TIFAQ96CG3 184 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 GAS2L1Q99501 681 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-218ENST00000578469 THAP2Q9H0W7 228 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 FAM124BQ9H5Z6 455 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-218ENST00000578469 NOD1Q9Y239 953 aa18.08■□□□□ 0.48
SREBF1-218ENST00000578469 NOC2LQ9Y3T9 749 aaKnown RBP18.08■□□□□ 0.48
SREBF1-218ENST00000578469 CD58P19256 250 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 ASPAP45381 313 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF132P52740 706 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 ACLYP53396 1101 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 HADHBP55084 474 aaKnown RBP18.07■□□□□ 0.48
SREBF1-218ENST00000578469 MYO1EQ12965 1108 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 PTK7Q13308 1070 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 PPIGQ13427 754 aaKnown RBP eCLIP18.07■□□□□ 0.48
SREBF1-218ENST00000578469 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 WDR72Q3MJ13 1102 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 MEI1Q5TIA1 1274 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 TWF2Q6IBS0 349 aaKnown RBP18.07■□□□□ 0.48
SREBF1-218ENST00000578469 HPDLQ96IR7 371 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 RPGRIP1Q96KN7 1286 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 GLT1D1Q96MS3 346 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF576Q9H609 170 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 CHST12Q9NRB3 414 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
SREBF1-218ENST00000578469 PUF60Q9UHX1 559 aaKnown RBP18.07■□□□□ 0.48
SREBF1-218ENST00000578469 TRIP12Q14669 1992 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-218ENST00000578469 GPR182O15218 404 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 TLR3O15455 904 aaKnown RBP18.06■□□□□ 0.48
SREBF1-218ENST00000578469 RECQL4O94761 1208 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 FTCDO95954 541 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 WEE2P0C1S8 567 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 MYBL1P10243 752 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 TNNC1P63316 161 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 FAAP100Q0VG06 881 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 GRIN2CQ14957 1233 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 RPS6KA1Q15418 735 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 UBXN11Q5T124 520 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 SCARA3Q6AZY7 606 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 SCARA5Q6ZMJ2 495 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 ZNF653Q96CK0 615 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 ARHGEF26Q96DR7 871 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 OSBPL9Q96SU4 736 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 APOL6Q9BWW8 343 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 TLR10Q9BXR5 811 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 BCO2Q9BYV7 579 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 NXF3Q9H4D5 531 aaKnown RBP18.06■□□□□ 0.48
SREBF1-218ENST00000578469 CNTN3Q9P232 1028 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 RNF14Q9UBS8 474 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 PARP2Q9UGN5 583 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 UBQLN1Q9UMX0 589 aaKnown RBP18.06■□□□□ 0.48
SREBF1-218ENST00000578469 POLIQ9UNA4 740 aa18.06■□□□□ 0.48
SREBF1-218ENST00000578469 TIMP1P01033 207 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 CD4P01730 458 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 CYP1A1P04798 512 aaPredicted RBP18.05■□□□□ 0.48
SREBF1-218ENST00000578469 CTSHP09668 335 aa18.05■□□□□ 0.48
SREBF1-218ENST00000578469 UNGP13051 313 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms