RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TCN1P20061 433 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-206ENST00000578373 PHKA2P46019 1235 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 TMEM119Q4V9L6 283 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 SCN4BQ8IWT1 228 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 CHST7Q9NS84 486 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 SLC5A4Q9NY91 659 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 PHTF1Q9UMS5 762 aa12.65□□□□□ -0.38
ERBB2-206ENST00000578373 TRIM49D1C9J1S8 452 aa12.65□□□□□ -0.39
ERBB2-206ENST00000578373 UBTFL6P0CB48 400 aaPredicted RBP12.65□□□□□ -0.39
ERBB2-206ENST00000578373 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.39
ERBB2-206ENST00000578373 ZNF200P98182 395 aaPredicted RBP12.65□□□□□ -0.39
ERBB2-206ENST00000578373 MICALL2Q8IY33 904 aa12.65□□□□□ -0.39
ERBB2-206ENST00000578373 FAM129AQ9BZQ8 928 aa12.65□□□□□ -0.39
ERBB2-206ENST00000578373 CNTNAP4Q9C0A0 1308 aa12.65□□□□□ -0.39
ERBB2-206ENST00000578373 METTL5Q9NRN9 209 aaKnown RBP12.65□□□□□ -0.39
ERBB2-206ENST00000578373 OATP04181 439 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 RXRBP28702 533 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 FLT3P36888 993 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 ARMCX2Q7L311 632 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 STAMBPL1Q96FJ0 436 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 DDX56Q9NY93 547 aaKnown RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 BFARQ9NZS9 450 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 HEY2Q9UBP5 337 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 NAALADL1Q9UQQ1 740 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 HUS1O60921 280 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 DGKIO75912 1065 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 ZWINTO95229 277 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 ZSCAN5DPP0CG00 497 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 PPP3CAQ08209 521 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 TMED1Q13445 227 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 C11orf63Q6NUN7 778 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 COL23A1Q86Y22 540 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 OR6P1Q8NGX9 317 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 ROPN1BQ9BZX4 212 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 ROPN1Q9HAT0 212 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 FZD1Q9UP38 647 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 SMG5Q9UPR3 1016 aaKnown RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 RICTORQ6R327 1708 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 RARBP10826 455 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 OSBPP22059 807 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 KIF19Q2TAC6 998 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 SLC51AQ86UW1 340 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 C4orf32Q8N8J7 132 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 TNFRSF25Q93038 417 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 TMEM237Q96Q45 408 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 PIH1D1Q9NWS0 290 aaKnown RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 DLGAP2Q9P1A6 1054 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 SAE1Q9UBE0 346 aaPredicted RBP12.64□□□□□ -0.39
ERBB2-206ENST00000578373 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 MYO5BQ9ULV0 1848 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 BCL9O00512 1426 aa12.64□□□□□ -0.39
ERBB2-206ENST00000578373 KIF3CO14782 793 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 GPR162Q16538 588 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 GLRA4Q5JXX5 417 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 PCDHGC5Q9Y5F6 944 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 PJA2O43164 708 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 FNTAP49354 379 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 RHBDL3P58872 404 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 CCNA1P78396 465 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 CUL2Q13617 745 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 COBLL1Q53SF7 1204 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 OTOP1Q7RTM1 612 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 NOP9Q86U38 636 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 ST13P4Q8IZP2 240 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 ZBBXA8MT70 800 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 TLR2O60603 784 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 NQO1P15559 274 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 PMLP29590 882 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 RARRES1P49788 294 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 STX3Q13277 289 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 TAF1BQ53T94 588 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 CDC26Q8NHZ8 85 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 PDCD6IPQ8WUM4 868 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 PRCCQ92733 491 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 MTBPQ96DY7 904 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 ZBTB45Q96K62 511 aaPredicted RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
ERBB2-206ENST00000578373 VCX3AQ9NNX9 186 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 KCND2Q9NZV8 630 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 SENP1Q9P0U3 644 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 APOL1O14791 398 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 TTC4O95801 387 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 SSTR1P30872 391 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 ABCD1P33897 745 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 SLC12A3P55017 1021 aa12.63□□□□□ -0.39
ERBB2-206ENST00000578373 OTUD4Q01804 1114 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms