RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 A0A0B4J269 797 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 OR6C75A6NL08 312 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 GJA1P17302 382 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 KCNA4P22459 653 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 GDI1P31150 447 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 ABCD1P33897 745 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 UBA7P41226 1012 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 GPR17Q13304 367 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 PLD1Q13393 1074 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 SPATA1Q5VX52 437 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 VITQ6UXI7 678 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 DSTYKQ6XUX3 929 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 GPBP1Q86WP2 473 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 MFSD6LQ8IWD5 586 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 CD302Q8IX05 232 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 YAF2Q8IY57 180 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 MYCT1Q8N699 235 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 ZSCAN18Q8TBC5 510 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 FAM126AQ9BYI3 521 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 RPF1Q9H9Y2 349 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 ZSCAN32Q9NX65 697 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 GPR179Q6PRD1 2367 aa13.64□□□□□ -0.23
SMARCD2-207ENST00000578234 TRAK2O60296 914 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 LILRB5O75023 590 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 FAM13AO94988 1023 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 VNN2O95498 520 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 BMP15O95972 392 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 TYMPP19971 482 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 VIPR2P41587 438 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 EPHB3P54753 998 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 MLLT6P55198 1093 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 LILRA4P59901 499 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 CEBPZQ03701 1054 aaKnown RBP13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 DUSP4Q13115 394 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 MYBPC2Q14324 1141 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 PRR23BQ6ZRT6 265 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 TMEM130Q8N3G9 435 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 PGLYRP2Q96PD5 576 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 IER2Q9BTL4 223 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 LRRC3Q9BY71 257 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 PRMT8Q9NR22 394 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 BLOC1S4Q9NUP1 217 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 HSFX1Q9UBD0 423 aa13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 CPSF3Q9UKF6 684 aaKnown RBP13.63□□□□□ -0.23
SMARCD2-207ENST00000578234 TICRRQ7Z2Z1 1910 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 K7ENM7 598 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 ZNF263O14978 683 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 OR4Q2P0C623 313 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 LONP1P36776 959 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 ALDH1A3P47895 512 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CDR1P51861 262 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 GTF2BQ00403 316 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 MTAPQ13126 283 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 DHX8Q14562 1220 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 TEAD2Q15562 447 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 JADE1Q6IE81 842 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CENPPQ6IPU0 288 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 ARMCX5Q6P1M9 558 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 TTC8Q8TAM2 541 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 SHKBP1Q8TBC3 707 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 FAM200AQ8TCP9 573 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CSGALNACT1Q8TDX6 532 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 FAM3CQ92520 227 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 MSTO1Q9BUK6 570 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 EPC1Q9H2F5 836 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CHRDQ9H2X0 955 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CRISPLD1Q9H336 500 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 LMAN1LQ9HAT1 526 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 GMEB2Q9UKD1 530 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 DERAQ9Y315 318 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 ASB3Q9Y575 518 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CLIC4Q9Y696 253 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 PIAS3Q9Y6X2 628 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 CEP250Q9BV73 2442 aa13.62□□□□□ -0.23
SMARCD2-207ENST00000578234 A0A1W2PRU2 124 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 ANO9A1A5B4 782 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 HEPACAM2A8MVW5 462 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 ARNTLO00327 626 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 PIRO00625 290 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 PPEF2O14830 753 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 FGF19O95750 216 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 F13A1P00488 732 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 CYP11A1P05108 521 aa13.61□□□□□ -0.23
SMARCD2-207ENST00000578234 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms