RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CNBD2Q96M20 576 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 TMEM117Q9H0C3 514 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ACAD9Q9H845 621 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SOX13Q9UN79 622 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 GRIN1Q05586 938 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ZC3H12BQ5HYM0 836 aaKnown RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 DDX42Q86XP3 938 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 FEZF2Q8TBJ5 459 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 IL18RAPO95256 599 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 RFC5P40937 340 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 RCN1Q15293 331 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 C11orf63Q6NUN7 778 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ADNPQ9H2P0 1102 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 CPVLQ9H3G5 476 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 MMADHCQ9H3L0 296 aaPredicted RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ANKZF1Q9H8Y5 726 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SPATA31A3Q5VYP0 1347 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 RAP1GDS1P52306 607 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 DNAJC3Q13217 504 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 MTFR1Q15390 333 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 KIAA1841Q6NSI8 718 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ARID3BQ8IVW6 561 aaPredicted RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 GGT7Q9UJ14 662 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ADGRB3O60242 1522 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 CIAPIN1Q6FI81 312 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SWSAP1Q6NVH7 229 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 FAM9CQ8IZT9 166 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ZNF518BQ9C0D4 1074 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 FAM192AQ9GZU8 254 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 EFCAB1Q9HAE3 211 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SP110Q9HB58 689 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 A0A087X0T9 212 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 RPS6KA5O75582 802 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 FAM228BP0C875 321 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SESN2P58004 480 aaPredicted RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 DAB2P98082 770 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 TTLL4Q14679 1199 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 LPAR1Q92633 364 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 ILKAPQ9H0C8 392 aaPredicted RBP11.23□□□□□ -0.61
SEC22B-201ENST00000578049 GOLPH3Q9H4A6 298 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 VPS9D1Q9Y2B5 631 aa11.23□□□□□ -0.61
SEC22B-201ENST00000578049 SLC4A1P02730 911 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 RAD51Q06609 339 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 MRPL28Q13084 256 aaKnown RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 NCOA4Q13772 614 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 USP10Q14694 798 aaKnown RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 KRT72Q14CN4 511 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 MEI1Q5TIA1 1274 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CLEC4FQ8N1N0 589 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CELF4Q9BZC1 486 aaKnown RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 FAM217BQ9NTX9 383 aaPredicted RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 DCDC2Q9UHG0 476 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 H3BQF6 201 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 TPI1P60174 286 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 NSUN2Q08J23 767 aaKnown RBP eCLIP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 TROAPQ12815 778 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 NAPEPLDQ6IQ20 393 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 ACAD10Q6JQN1 1059 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 C1orf228Q6PIY5 440 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 EGFL8Q99944 293 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 NIF3L1Q9GZT8 377 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 UNC45AQ9H3U1 944 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 PAPOLBQ9NRJ5 636 aaKnown RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CHMP2BQ9UQN3 213 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 NEXMIFQ5QGS0 1516 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 EAPPQ56P03 285 aaPredicted RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 ELMSAN1Q6PJG2 1045 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CRELD2Q6UXH1 353 aaPredicted RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 RPL26L1Q9UNX3 145 aaKnown RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 KDM6AO15550 1401 aaPredicted RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 FCGR1AP12314 374 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 PTK6Q13882 451 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 LINC00523Q86TU6 105 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 SCUBE1Q8IWY4 988 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CST8O60676 142 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 PDE5AO76074 875 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 KRT75O95678 551 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 ALBP02768 609 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 AKR1B1P15121 316 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 PTENP60484 403 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 HORMAD1Q86X24 394 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 PARD3BQ8TEW8 1205 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 APPL1Q9UKG1 709 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 CAPN6Q9Y6Q1 641 aa11.22□□□□□ -0.61
SEC22B-201ENST00000578049 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms