RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 ENPP3O14638 875 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 ZNF263O14978 683 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 CILPO75339 1184 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 LSM8O95777 96 aaKnown RBP13.3□□□□□ -0.28
TSEN54-204ENST00000577197 FAM228BP0C875 321 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
TSEN54-204ENST00000577197 KIF5AQ12840 1032 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 SPOPLQ6IQ16 392 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 ALKBH5Q6P6C2 394 aaKnown RBP13.3□□□□□ -0.28
TSEN54-204ENST00000577197 C16orf59Q7L2K0 433 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 CRIPAKQ8N1N5 446 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 TOP6BLQ8N6T0 577 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 RBBP8NLQ8NC74 664 aaPredicted RBP13.3□□□□□ -0.28
TSEN54-204ENST00000577197 DDX1Q92499 740 aaKnown RBP13.3□□□□□ -0.28
TSEN54-204ENST00000577197 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
TSEN54-204ENST00000577197 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 PCDHA13Q9Y5I0 950 aa13.3□□□□□ -0.28
TSEN54-204ENST00000577197 TDRD15B5MCY1 1934 aaKnown RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TMEM189-UBE2V1I3L0A0 370 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 CYP26A1O43174 497 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 MED7O43513 233 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 ACRP10323 421 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TNFAIP3P21580 790 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 CDH5P33151 784 aaPredicted RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 MLH1P40692 756 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 MAGEA1P43355 309 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 MLLT1Q03111 559 aaPredicted RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 ARID5AQ03989 594 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TUSC3Q13454 348 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 IFI16Q16666 785 aaKnown RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TCTN1Q2MV58 587 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TMEM270Q6UE05 265 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 ZNF365Q70YC5 407 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 KIAA1328Q86T90 577 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 RTN4RL1Q86UN2 441 aaPredicted RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 URGCPQ8TCY9 931 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 LINC01599Q8WXQ3 324 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 VCPIP1Q96JH7 1222 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 GAD1Q99259 594 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 ARID3AQ99856 593 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 APOL6Q9BWW8 343 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 MRPL9Q9BYD2 267 aaKnown RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 ISCUQ9H1K1 167 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 MTIF3Q9H2K0 278 aaKnown RBP13.29□□□□□ -0.28
TSEN54-204ENST00000577197 TUBGCP4Q9UGJ1 667 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 PCDHB4Q9Y5E5 795 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 SCN1AP35498 2009 aa13.29□□□□□ -0.28
TSEN54-204ENST00000577197 DNAH12Q6ZR08 3092 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 ANKRD62A6NC57 917 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 KPNA7A9QM74 516 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 KIF5CO60282 957 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 RTN2O75298 545 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 AMHP03971 560 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 KRT5P13647 590 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 ARHGAP25P42331 645 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 HADHBP55084 474 aaKnown RBP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 LILRA4P59901 499 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 FMO1Q01740 532 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 GFPT1Q06210 699 aaPredicted RBP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 DSC1Q08554 894 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 TMEM240Q5SV17 173 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 NOP9Q86U38 636 aaKnown RBP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 NPAS4Q8IUM7 802 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 ACRBPQ8NEB7 543 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 HERVK_113Q902F9 699 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 C18orf25Q96B23 403 aaPredicted RBP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■■■■■ 29.7
TSEN54-204ENST00000577197 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.28□□□□□ -0.28
TSEN54-204ENST00000577197 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 DSEQ9UL01 958 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 MICAL3Q7RTP6 2002 aa13.28□□□□□ -0.28
TSEN54-204ENST00000577197 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.27□□□□□ -0.29
TSEN54-204ENST00000577197 USP27XA6NNY8 438 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 H0YGN5 161 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.29
TSEN54-204ENST00000577197 H2AFZP0C0S5 128 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 TMEM253P0C7T8 217 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 MYBL1P10243 752 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.29
TSEN54-204ENST00000577197 GNA15P30679 374 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 USP8P40818 1118 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 SCNN1GP51170 649 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 EPHB4P54760 987 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 CENPCQ03188 943 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 SOX4Q06945 474 aaPredicted RBP13.27□□□□□ -0.29
TSEN54-204ENST00000577197 UPP1Q16831 310 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 NOMO2Q5JPE7 1267 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 GLRA4Q5JXX5 417 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 CCDC122Q5T0U0 273 aa13.27□□□□□ -0.29
TSEN54-204ENST00000577197 DCLRE1AQ6PJP8 1040 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms