RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MAFFQ9ULX9 164 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 PCDHB8Q9UN66 801 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 KIAA1024Q9UPX6 916 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 GREB1Q4ZG55 1949 aa11.05□□□□□ -0.64
NPLOC4-220ENST00000576940 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 GIPC1O14908 333 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 OAZ2O95190 189 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 MCF2P10911 925 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 SPINK2P20155 84 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 PROZP22891 400 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 GABRR2P28476 465 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 ALDH1A3P47895 512 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 NPTX2P47972 431 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 EPHB3P54753 998 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 YWHAHQ04917 246 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 ME3Q16798 604 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 GPR158Q5T848 1215 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 CENPPQ6IPU0 288 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 TCEAL6Q6IPX3 200 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 PSAPL1Q6NUJ1 521 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 SYNPOQ8N3V7 929 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 ATAD1Q8NBU5 361 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 ERMNQ8TAM6 284 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 TCEAL3Q969E4 200 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 SMG9Q9H0W8 520 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 TMEM134Q9H6X4 195 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 ZMIZ1Q9ULJ6 1067 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 LAMA1P25391 3075 aa11.04□□□□□ -0.64
NPLOC4-220ENST00000576940 ATRXP46100 2492 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 E9PMD0 336 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 M0QZQ0 153 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 DCLK1O15075 740 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 EPB41L2O43491 1005 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 JAK2O60674 1132 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 LARGE1O95461 756 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 PRAMEF12O95522 483 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 TOP3BO95985 862 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 CCT6AP40227 531 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 CYP4F8P98187 520 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 GUCY1B3Q02153 619 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 GPR17Q13304 367 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 FSTL4Q6MZW2 842 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 DAW1Q8N136 415 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 TTC9BQ8N6N2 239 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 BPIFB1Q8TDL5 484 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 TMEM209Q96SK2 561 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 FBRSL1Q9HCM7 1045 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 KMT5AQ9NQR1 393 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 GKN1Q9NS71 199 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 SLC8A2Q9UPR5 921 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 KIF26AQ9ULI4 1882 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 SPAG17Q6Q759 2223 aa11.03□□□□□ -0.64
NPLOC4-220ENST00000576940 MTMR11A4FU01 709 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 OTOL1A6NHN0 477 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 C4orf47A7E2U8 309 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 SLC16A4O15374 487 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 HIP1RO75146 1068 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 OR52Z1P0C646 297 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 MPLP40238 635 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 GUCY2FP51841 1108 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 FOXC1Q12948 553 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 PLD1Q13393 1074 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 ITPRIPL2Q3MIP1 535 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 PLK5Q496M5 336 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 TRIM68Q6AZZ1 485 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 MPZL3Q6UWV2 235 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 UNQ6494/PRO21346Q6UXR6 183 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 DSTYKQ6XUX3 929 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 USP37Q86T82 979 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 NSUN7Q8NE18 718 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 PSMG2Q969U7 264 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 CHFRQ96EP1 664 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 ZC3H10Q96K80 434 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 LPIN3Q9BQK8 851 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 SLC46A2Q9BY10 475 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 DUSP15Q9H1R2 295 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 VPS45Q9NRW7 570 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 DDX19AQ9NUU7 478 aaKnown RBP11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 OBP2AQ9NY56 170 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 ARHGAP28Q9P2N2 729 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 PHLPP2Q6ZVD8 1323 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 SPEGQ15772 3267 aa11.02□□□□□ -0.65
NPLOC4-220ENST00000576940 FAM208BQ5VWN6 2430 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 CITO14578 2027 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 PPEF2O14830 753 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 ZZEF1O43149 2961 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 RNF40O75150 1001 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 EGFP01133 1207 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 CXCL8P10145 99 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 MUTP22033 750 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 U2AF2P26368 475 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■□□□□ 11.3
NPLOC4-220ENST00000576940 LRPAP1P30533 357 aa11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 NOVA1P51513 510 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-220ENST00000576940 GALK1P51570 392 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms