RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 SIX2Q9NPC8 291 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 NXF1Q9UBU9 619 aaKnown RBP9.16□□□□□ -0.94
PRPF8-213ENST00000576407 MTUS1Q9ULD2 1270 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 POLIQ9UNA4 740 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 SNX9Q9Y5X1 595 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 NLRC5Q86WI3 1866 aa9.16□□□□□ -0.94
PRPF8-213ENST00000576407 SF3B1O75533 1304 aaKnown RBP eCLIP9.15□□□□□ -0.947e-6■■■■■ 28.7
PRPF8-213ENST00000576407 UQCRHLA0A096LP55 91 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 C5orf67F2Z3F1 127 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 CYB561D2O14569 222 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 TRAPPC3O43617 180 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 HUS1O60921 280 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 NOL4O94818 638 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 UQCRHP07919 91 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 P4HA1P13674 534 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ASPAP45381 313 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ZNF75DP51815 510 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ERVK-21P61565 698 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 TNNC1P63316 161 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 KRT17Q04695 432 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ELAVL2Q12926 359 aaKnown RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 SOWAHAQ2M3V2 549 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 KLHDC7AQ5VTJ3 777 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 FAM171A1Q5VUB5 890 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 FUT10Q6P4F1 479 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 GJB7Q6PEY0 223 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 SCARA5Q6ZMJ2 495 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 RRAGAQ7L523 313 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 TAS1R1Q7RTX1 841 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 DDX53Q86TM3 631 aaKnown RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ARHGEF19Q8IW93 802 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 RNF168Q8IYW5 571 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 PPM1KQ8N3J5 372 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 PDCL2Q8N4E4 241 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 APPL2Q8NEU8 664 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 TIFAQ96CG3 184 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 FAXDC2Q96IV6 333 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 SAMD11Q96NU1 681 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ARID3AQ99856 593 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 PLVAPQ9BX97 442 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 VN1R3Q9BXE9 311 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 BCO2Q9BYV7 579 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 SMYD3Q9H7B4 428 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 CERS4Q9HA82 394 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 UBE2TQ9NPD8 197 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 PLCB1Q9NQ66 1216 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 APEX2Q9UBZ4 518 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 ZKSCAN5Q9Y2L8 839 aa9.15□□□□□ -0.94
PRPF8-213ENST00000576407 TIMM13Q9Y5L4 95 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-213ENST00000576407 CHD9Q3L8U1 2897 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 EPHB6O15197 1021 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 ADCY5O95622 1261 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 CYP11A1P05108 521 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 RB1P06400 928 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 WEE2P0C1S8 567 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 ODC1P11926 461 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 UCHL3P15374 230 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 FGFR3P22607 806 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 TBXAS1P24557 533 aaPredicted RBP9.14□□□□□ -0.95
PRPF8-213ENST00000576407 TKTP29401 623 aaKnown RBP9.14□□□□□ -0.95
PRPF8-213ENST00000576407 RAP1GAPP47736 663 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 CDH8P55286 799 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 PLCB3Q01970 1234 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 GCNT1Q02742 428 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 CUL2Q13617 745 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 WSCD1Q658N2 575 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 IQCEQ6IPM2 695 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 DPH6Q7L8W6 267 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 LIMS2Q7Z4I7 341 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 CEP57Q86XR8 500 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 VSTM4Q8IW00 320 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 NEK11Q8NG66 645 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 KAT5Q92993 513 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 MRFAP1L1Q96HT8 127 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 B3GALT6Q96L58 329 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 KREMEN1Q96MU8 473 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 MRPL45Q9BRJ2 306 aaKnown RBP9.14□□□□□ -0.95
PRPF8-213ENST00000576407 C11orf84Q9BUA3 381 aaPredicted RBP9.14□□□□□ -0.95
PRPF8-213ENST00000576407 SDCBP2Q9H190 292 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 GANQ9H2C0 597 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 CYP3A43Q9HB55 503 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
PRPF8-213ENST00000576407 DNAJC12Q9UKB3 198 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 AJAP1Q9UKB5 411 aaPredicted RBP9.14□□□□□ -0.95
PRPF8-213ENST00000576407 PCDHB8Q9UN66 801 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 L1RE1Q9UN81 338 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 FHOD1Q9Y613 1164 aa9.14□□□□□ -0.95
PRPF8-213ENST00000576407 PLXNA4Q9HCM2 1894 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 ITIH6Q6UXX5 1313 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 TSC2P49815 1807 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 ARHGEF37A1IGU5 675 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 SYN3O14994 580 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 TACC1O75410 805 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 SOD2P04179 222 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms