RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ANK1P16157 1881 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 C5orf42Q9H799 3197 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 SPTLC1O15269 473 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 KINO60870 393 aaKnown RBP16.44■□□□□ 0.22
SMG6-220ENST00000576218 HUS1O60921 280 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 PHACTR2O75167 634 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 RHOBTB3O94955 611 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 OAZ2O95190 189 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 OR4Q2P0C623 313 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 ATF2P15336 505 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 FSHRP23945 695 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
SMG6-220ENST00000576218 RTL10Q7L3V2 364 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 WDR49Q8IV35 697 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 LRRC52Q8N7C0 313 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 FEZF2Q8TBJ5 459 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 RHOBTB2Q9BYZ6 727 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 INTS13Q9NVM9 706 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
SMG6-220ENST00000576218 MAPK8IP1Q9UQF2 711 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 FRMD4BQ9Y2L6 1034 aa16.44■□□□□ 0.22
SMG6-220ENST00000576218 CYP24A1Q07973 514 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 TRPC3Q13507 836 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 PNOCQ13519 176 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 KCNB1Q14721 858 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 PSMD6Q15008 389 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 PTPN21Q16825 1174 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
SMG6-220ENST00000576218 CEP135Q66GS9 1140 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 IQCEQ6IPM2 695 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 C12orf56Q8IXR9 622 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 FMR1NBQ8N0W7 255 aaPredicted RBP16.43■□□□□ 0.22
SMG6-220ENST00000576218 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 CGRRF1Q99675 332 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 LIMD1Q9UGP4 676 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 INSL5Q9Y5Q6 135 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
SMG6-220ENST00000576218 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
SMG6-220ENST00000576218 PDXKO00764 312 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 TBC1D4O60343 1298 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 ABLIM3O94929 683 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 NR3C1P04150 777 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 TSPY1Q01534 308 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 PLD1Q13393 1074 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 BIRC3Q13489 604 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 MYBPC2Q14324 1141 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 WSCD1Q658N2 575 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 RNF19BQ6ZMZ0 732 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 TCEAL8Q8IYN2 117 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 ZDHHC14Q8IZN3 488 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 OR5B17Q8NGF7 314 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 SMARCE1Q969G3 411 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 HPDLQ96IR7 371 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMG6-220ENST00000576218 MAFFQ9ULX9 164 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 C2orf16Q68DN1 1984 aa16.42■□□□□ 0.22
SMG6-220ENST00000576218 CYP11A1P05108 521 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 ASGR2P07307 311 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
SMG6-220ENST00000576218 ALDH1A3P47895 512 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 NTHL1P78549 312 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 MYL7Q01449 175 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 TWF1Q12792 350 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 SLC39A12Q504Y0 691 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 DCP1BQ8IZD4 617 aaKnown RBP16.41■□□□□ 0.22
SMG6-220ENST00000576218 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
SMG6-220ENST00000576218 MMS19Q96T76 1030 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 CORO1BQ9BR76 489 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 HCFC1R1Q9NWW0 138 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 SORCS3Q9UPU3 1222 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 MRPS23Q9Y3D9 190 aaKnown RBP16.41■□□□□ 0.22
SMG6-220ENST00000576218 PTPRJQ12913 1337 aa16.41■□□□□ 0.22
SMG6-220ENST00000576218 SEC24AO95486 1093 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 PTPN2P17706 415 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 EPHB3P54753 998 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 TNNC1P63316 161 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 ZXDAP98168 799 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 GPR17Q13304 367 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 TAF12Q16514 161 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 PDZD4Q76G19 769 aaPredicted RBP16.4■□□□□ 0.22
SMG6-220ENST00000576218 TRAPPC11Q7Z392 1133 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 SMYD4Q8IYR2 804 aaPredicted RBP16.4■□□□□ 0.22
SMG6-220ENST00000576218 ADGRF2Q8IZF7 708 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 TMEM86AQ8N2M4 240 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 GUF1Q8N442 669 aaKnown RBP16.4■□□□□ 0.22
SMG6-220ENST00000576218 EDAQ92838 391 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 TIGD1Q96MW7 591 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 SEPT5Q99719 369 aaPredicted RBP16.4■□□□□ 0.22
SMG6-220ENST00000576218 TSG101Q99816 390 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 KCTD10Q9H3F6 313 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 YIPF1Q9Y548 306 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 SCN1AP35498 2009 aa16.4■□□□□ 0.22
SMG6-220ENST00000576218 MTMR11A4FU01 709 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 RHOP08100 348 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 POU2F2P09086 479 aa16.39■□□□□ 0.21
SMG6-220ENST00000576218 KRT13P13646 458 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms