RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	SLC7A14	Q8TBB6	771 aa		27.29	■■□□□ 1.96
SRRM2-223	ENST00000575701	MFSD14A	Q96MC6	490 aa		27.29	■■□□□ 1.96
SRRM2-223	ENST00000575701	CGRRF1	Q99675	332 aa		27.29	■■□□□ 1.96
SRRM2-223	ENST00000575701	WDR6	Q9NNW5	1121 aa	Known RBP	27.29	■■□□□ 1.96
SRRM2-223	ENST00000575701	MUC3A	Q02505	3323 aa		27.29	■■□□□ 1.96
SRRM2-223	ENST00000575701	CYB561D2	O14569	222 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	XYLB	O75191	536 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	NR3C1	P04150	777 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	CPB1	P15086	417 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	ARPP19	P56211	112 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	NFIL3	Q16649	462 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	CXorf38	Q8TB03	319 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	SPATA20	Q8TB22	786 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	TSHZ2	Q9NRE2	1034 aa		27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	AFF4	Q9UHB7	1163 aa	Known RBP	27.28	■■□□□ 1.96
SRRM2-223	ENST00000575701	CLUH	O75153	1309 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	PTPRJ	Q12913	1337 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	KRT19	P08727	400 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	DLAT	P10515	647 aa	Known RBP	27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	ALAD	P13716	330 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	TNNI1	P19237	187 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	MYO1E	Q12965	1108 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	RNF135	Q8IUD6	432 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	TCEAL8	Q8IYN2	117 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	TDRD5	Q8NAT2	981 aa	Known RBP	27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	OR5B17	Q8NGF7	314 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	SMARCE1	Q969G3	411 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	ACSF2	Q96CM8	615 aa	Predicted RBP	27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	BORCS6	Q96GS4	357 aa		27.27	■■□□□ 1.96
SRRM2-223	ENST00000575701	C5orf42	Q9H799	3197 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	PRRG1	O14668	218 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	UBE2H	P62256	183 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	LMBRD2	Q68DH5	695 aa	Predicted RBP	27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	OTOP3	Q7RTS5	596 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	PLCD3	Q8N3E9	789 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	CCDC127	Q96BQ5	260 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	SIX4	Q9UIU6	781 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	BDP1	A6H8Y1	2624 aa		27.26	■■□□□ 1.95
SRRM2-223	ENST00000575701	PI4K2B	G5E9Z4	385 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	GADD45B	O75293	160 aa	Predicted RBP	27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	AP3M2	P53677	418 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	BFSP1	Q12934	665 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	COBLL1	Q53SF7	1204 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	ZDHHC14	Q8IZN3	488 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	THEM5	Q8N1Q8	247 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	FEZF2	Q8TBJ5	459 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	SPATA18	Q8TC71	538 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	CYP4F11	Q9HBI6	524 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	GDAP2	Q9NXN4	497 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	MAPK8IP1	Q9UQF2	711 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	FRMD4B	Q9Y2L6	1034 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	PCDHA5	Q9Y5H7	936 aa		27.25	■■□□□ 1.95
SRRM2-223	ENST00000575701	MAPK13	O15264	365 aa		27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	DCX	O43602	365 aa		27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	HUS1	O60921	280 aa		27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	RPL13	P26373	211 aa	Known RBP	27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	GPR17	Q13304	367 aa		27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	TRAPPC11	Q7Z392	1133 aa		27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	TMEM86A	Q8N2M4	240 aa		27.24	■■□□□ 1.95
SRRM2-223	ENST00000575701	C2CD4D	B7Z1M9	353 aa		27.23	■■□□□ 1.95
SRRM2-223	ENST00000575701	LRG1	P02750	347 aa		27.23	■■□□□ 1.95
SRRM2-223	ENST00000575701	SP100	P23497	879 aa	Predicted RBP	27.23	■■□□□ 1.95
SRRM2-223	ENST00000575701	ADCY1	Q08828	1119 aa		27.23	■■□□□ 1.95
SRRM2-223	ENST00000575701	KHSRP	Q92945	711 aa	Known RBP eCLIP	27.23	■■□□□ 1.95
SRRM2-223	ENST00000575701	FAM84A	Q96KN4	292 aa		27.23	■■□□□ 1.95
SRRM2-223	ENST00000575701	CCL16	O15467	120 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	NR2F2	P24468	414 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	CLDN10	P78369	228 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	EDRF1	Q3B7T1	1238 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	ZCWPW2	Q504Y3	356 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	WSCD1	Q658N2	575 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	CEP135	Q66GS9	1140 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	RNF19B	Q6ZMZ0	732 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	TOP6BL	Q8N6T0	577 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	PARD3B	Q8TEW8	1205 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	HPDL	Q96IR7	371 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	C1QTNF1	Q9BXJ1	281 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	INSL5	Q9Y5Q6	135 aa		27.22	■■□□□ 1.95
SRRM2-223	ENST00000575701	SMARCB1	Q12824	385 aa		27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	DPH6	Q7L8W6	267 aa		27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	TMC2	Q8TDI7	906 aa		27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	GZF1	Q9H116	711 aa	Predicted RBP	27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	HSFX1	Q9UBD0	423 aa		27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	POLI	Q9UNA4	740 aa		27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	SNX9	Q9Y5X1	595 aa		27.21	■■□□□ 1.95
SRRM2-223	ENST00000575701	SEC24A	O95486	1093 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	OR4Q2	P0C623	313 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	PPP1R2	P41236	205 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	CASP4	P49662	377 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	PLD1	Q13393	1074 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	GRASP	Q7Z6J2	395 aa	Predicted RBP	27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	SMYD4	Q8IYR2	804 aa	Predicted RBP	27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	PDCL2	Q8N4E4	241 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	OR10T2	Q8NGX3	314 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	C2orf15	Q8WU43	125 aa	Known RBP	27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	ZCWPW1	Q9H0M4	648 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	MUTYH	Q9UIF7	546 aa		27.2	■■□□□ 1.94
SRRM2-223	ENST00000575701	L1RE1	Q9UN81	338 aa		27.2	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms