RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 WDR6Q9NNW5 1121 aaKnown RBP9.38□□□□□ -0.91
SMG6-216ENST00000575176 EXOC1Q9NV70 894 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 HCFC1R1Q9NWW0 138 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 MUTYHQ9UIF7 546 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 FRYLO94915 3013 aa9.38□□□□□ -0.91
SMG6-216ENST00000575176 CCDC195A0A1B0GUA6 201 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 MTMR11A4FU01 709 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 LRRIQ3A6PVS8 624 aaPredicted RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 PDXKO00764 312 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 GABRDO14764 452 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 TRAPPC3O43617 180 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 VNN1O95497 513 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 ATF2P15336 505 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 CD44P16070 742 aaKnown RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 SP100P23497 879 aaPredicted RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 CCR2P41597 374 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 MTHFRP42898 656 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 TAF6P49848 677 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 CYP2J2P51589 502 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 DLG4P78352 724 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 NTHL1P78549 312 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 PSMD2Q13200 908 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 TDRD10Q5VZ19 366 aaKnown RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 ZNF280DQ6N043 979 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 RNF19BQ6ZMZ0 732 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 TMC8Q8IU68 726 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 WDR49Q8IV35 697 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 ELOA2Q8IYF1 753 aaPredicted RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 SYCP3Q8IZU3 236 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 PDCL2Q8N4E4 241 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 LRRC52Q8N7C0 313 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 PARD3BQ8TEW8 1205 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 POP1Q99575 1024 aaKnown RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 TMLHEQ9NVH6 421 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 GDAP2Q9NXN4 497 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 CGNQ9P2M7 1197 aaKnown RBP9.37□□□□□ -0.91
SMG6-216ENST00000575176 ITGA11Q9UKX5 1188 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 FAM50BQ9Y247 325 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 INSL5Q9Y5Q6 135 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 MIA3Q5JRA6 1907 aa9.37□□□□□ -0.91
SMG6-216ENST00000575176 XPOTO43592 962 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 AKAP3O75969 853 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 NR3C1P04150 777 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 HNRNPA1P09651 372 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMG6-216ENST00000575176 ATF6P18850 670 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 FCARP24071 287 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 EPHA5P54756 1037 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 YWHAHQ04917 246 aaPredicted RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 PTPN21Q16825 1174 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 SOWAHAQ2M3V2 549 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 WSCD1Q658N2 575 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 OVOS1Q6IE37 1185 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 CYP26C1Q6V0L0 522 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 STXBP4Q6ZWJ1 553 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 ITFG1Q8TB96 612 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 SMG7Q92540 1137 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 ASIC4Q96FT7 647 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 RPGRIP1Q96KN7 1286 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 RIPOR3Q96MK2 946 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 MED15Q96RN5 788 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 ZCWPW1Q9H0M4 648 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 AVENQ9NQS1 362 aaPredicted RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 TMEM30AQ9NV96 361 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 CEP72Q9P209 647 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 EPS15L1Q9UBC2 864 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 DNMT3BQ9UBC3 853 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 AFF4Q9UHB7 1163 aaKnown RBP9.36□□□□□ -0.91
SMG6-216ENST00000575176 YIPF1Q9Y548 306 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 NUB1Q9Y5A7 615 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 PCDHA5Q9Y5H7 936 aa9.36□□□□□ -0.91
SMG6-216ENST00000575176 ZNF233A6NK53 670 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 ANHXE9PGG2 379 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 MAPK13O15264 365 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 CCL16O15467 120 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 DCXO43602 365 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 LRRN2O75325 713 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
SMG6-216ENST00000575176 C4BPAP04003 597 aaKnown RBP9.35□□□□□ -0.91
SMG6-216ENST00000575176 ASGR2P07307 311 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 ODC1P11926 461 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 PAX3P23760 479 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 PRCPP42785 496 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 GPR17Q13304 367 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 MYBPC2Q14324 1141 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 ZACNQ401N2 412 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 TPGS2Q68CL5 300 aa9.35□□□□□ -0.91
SMG6-216ENST00000575176 CENPPQ6IPU0 288 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms