RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ARL8AQ96BM9 186 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 FMO2Q99518 471 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 POLIQ9UNA4 740 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 ERLIN2O94905 339 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 LSM8O95777 96 aaKnown RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 PTGIRP43119 386 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 YWHAEP62258 255 aaKnown RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 LACTBP83111 547 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 SIX1Q15475 284 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 DGKDQ16760 1214 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 TTMPQ5BVD1 217 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 ZNF667Q5HYK9 610 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 JADE1Q6IE81 842 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 C1orf127Q8N9H9 656 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 TMEM35BQ8NCS4 154 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 UBLCP1Q8WVY7 318 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 ZMYND15Q9H091 742 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 PTPN22Q9Y2R2 807 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 CEP83Q9Y592 693 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 PODXLO00592 558 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 GJB6O95452 261 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 ITGB3P05106 788 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 COILP38432 576 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-208ENST00000574755 RAP1GAPP47736 663 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 TMC3Q7Z5M5 1100 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 NPLOC4Q8TAT6 608 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 RUNDC3BQ96NL0 473 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 SIX4Q9UIU6 781 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 USTQ9Y2C2 406 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 SNX24Q9Y343 169 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 FSCN2O14926 492 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 CALB1P05937 261 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 SSR1P43307 286 aaKnown RBP14.92□□□□□ -0.02
VPS33B-208ENST00000574755 DHX9Q08211 1270 aaKnown RBP14.92□□□□□ -0.02
VPS33B-208ENST00000574755 MTMR3Q13615 1198 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 UAP1Q16222 522 aaPredicted RBP14.92□□□□□ -0.02
VPS33B-208ENST00000574755 SGO2Q562F6 1265 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 MARCH8Q5T0T0 291 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 CCDC50Q8IVM0 306 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 CD302Q8IX05 232 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 RHOT1Q8IXI2 618 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 TFAP2BQ92481 460 aa14.92□□□□□ -0.02
VPS33B-208ENST00000574755 DDX27Q96GQ7 796 aaKnown RBP14.92□□□□□ -0.02
VPS33B-208ENST00000574755 PSTPIP1O43586 416 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 KCNJ1P48048 391 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 FNTAP49354 379 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 DRG2P55039 364 aaKnown RBP14.91□□□□□ -0.02
VPS33B-208ENST00000574755 PLTPP55058 493 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 RPL7AP62424 266 aaKnown RBP14.91□□□□□ -0.02
VPS33B-208ENST00000574755 CEP85LQ5SZL2 805 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 KCTD16Q68DU8 428 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 IQSEC1Q6DN90 963 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 TMEM130Q8N3G9 435 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 C12orf50Q8NA57 414 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-208ENST00000574755 ZNF518BQ9C0D4 1074 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 ASB7Q9H672 318 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 O00370 1275 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 MEFVO15553 781 aaPredicted RBP14.91□□□□□ -0.02
VPS33B-208ENST00000574755 ADCY6O43306 1168 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 TSPAN1O60635 241 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 CD19P15391 556 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
VPS33B-208ENST00000574755 GJC1P36383 396 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 CDH8P55286 799 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 MAIP1Q8WWC4 291 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 C1orf54Q8WWF1 131 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 ADPGKQ9BRR6 497 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 LRRC19Q9H756 370 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 ZDHHC18Q9NUE0 388 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 SLC5A4Q9NY91 659 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 IP6K2Q9UHH9 426 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 PCDHGC3Q9UN70 934 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 CITO14578 2027 aa14.91□□□□□ -0.02
VPS33B-208ENST00000574755 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 ECEL1O95672 775 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 HOXD8P13378 290 aaPredicted RBP14.9□□□□□ -0.02
VPS33B-208ENST00000574755 TAS2R40P59535 323 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 KYAT1Q16773 422 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 SLC10A6Q3KNW5 377 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 DNAJC24Q6P3W2 148 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 LRIG3Q6UXM1 1119 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 LEKR1Q6ZMV7 388 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 ERICH1Q86X53 443 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 KIAA0319LQ8IZA0 1049 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 FBXO25Q8TCJ0 367 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 BCO2Q9BYV7 579 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 RRAGCQ9HB90 399 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 SETD4Q9NVD3 440 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 CPA4Q9UI42 421 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 GINS2Q9Y248 185 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 ATP8A1Q9Y2Q0 1164 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 SLC15A5A6NIM6 579 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 RPL21P46778 160 aaKnown RBP14.9□□□□□ -0.02
VPS33B-208ENST00000574755 SNX1Q13596 522 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 TMEM132DQ14C87 1099 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 PPP1R7Q15435 360 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 DNAJC21Q5F1R6 531 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms