RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 C4BPAP04003 597 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 CCDC192P0DO97 292 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 P4HA1P13674 534 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 RPL17P18621 184 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 OR1D2P34982 312 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TNNC1P63316 161 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 DLG4P78352 724 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 NCOA4Q13772 614 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 KCNC3Q14003 757 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 RAB33AQ14088 237 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 SGSM1Q2NKQ1 1148 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 KLHL40Q2TBA0 621 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 ZACNQ401N2 412 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 DCAF17Q5H9S7 520 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TDRD10Q5VZ19 366 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 KRT39Q6A163 491 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 PALB2Q86YC2 1186 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TMEM130Q8N3G9 435 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TOP6BLQ8N6T0 577 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 CXorf38Q8TB03 319 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 PLEKHO2Q8TD55 490 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 SLC22A17Q8WUG5 538 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TAF4BQ92750 862 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 DUSP9Q99956 384 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 SRRTQ9BXP5 876 aaKnown RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 GZF1Q9H116 711 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TMEM8AQ9HCN3 771 aa13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TIMM13Q9Y5L4 95 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC1-206ENST00000573989 TSC2P49815 1807 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 COL6A3P12111 3177 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 TGM5O43548 720 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 CST3P01034 146 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 TRIM49P0CI25 452 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 TRIM49CP0CI26 452 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 CPB1P15086 417 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 EPCAMP16422 314 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 ELF1P32519 619 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 PIK3CAP42336 1068 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 GCLMP48507 274 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 LHX1P48742 406 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 MCCD1P59942 119 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 MYL7Q01449 175 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 CETN1Q12798 172 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 STX1AQ16623 288 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 ZNF699Q32M78 642 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 WDR72Q3MJ13 1102 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 LIN9Q5TKA1 542 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 TPGS2Q68CL5 300 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 SLC8B1Q6J4K2 584 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 CES5AQ6NT32 575 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 ANKRD54Q6NXT1 300 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 BORCS6Q96GS4 357 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 MMS19Q96T76 1030 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 MMRN2Q9H8L6 949 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 MAN1C1Q9NR34 630 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 CD207Q9UJ71 328 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 FBXL5Q9UKA1 691 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC1-206ENST00000573989 EYSQ5T1H1 3165 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 H3BQ06 376 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 N4BP1O75113 896 aaKnown RBP13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 TBX10O75333 385 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 GLP2RO95838 553 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 FAM163BP0C2L3 166 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 LTBRP36941 435 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 MXI1P50539 228 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 ARPP19P56211 112 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 MYL6P60660 151 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 TSPY1Q01534 308 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 ITIH3Q06033 890 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 SMARCB1Q12824 385 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 UVSSAQ2YD98 709 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 LEXMQ3ZCV2 418 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 WSCD1Q658N2 575 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 CCDC149Q6ZUS6 474 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 ADGRF2Q8IZF7 708 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 KREMEN2Q8NCW0 462 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 NAT10Q9H0A0 1025 aaKnown RBP13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 SFXN1Q9H9B4 322 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 PRDM6Q9NQX0 595 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
TRAPPC1-206ENST00000573989 TBC1D4O60343 1298 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 HLA-DRAP01903 254 aa13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 TRIM21P19474 475 aaKnown RBP13.69□□□□□ -0.22
TRAPPC1-206ENST00000573989 PCSK1P29120 753 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms