RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 GALR2O43603 387 aaPredicted RBP18.86■□□□□ 0.61
SMG6-214ENST00000573827 CFHP08603 1231 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 PTPN2P17706 415 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 AOC1P19801 751 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 FCARP24071 287 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 ELF1P32519 619 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 DNM1Q05193 864 aaKnown RBP18.86■□□□□ 0.61
SMG6-214ENST00000573827 MYBPC2Q14324 1141 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 RESP18Q5W5W9 173 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 OVOS1Q6IE37 1185 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 DSTYKQ6XUX3 929 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 KCNG4Q8TDN1 519 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 ING5Q8WYH8 240 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 C7orf25Q9BPX7 421 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 FAM213AQ9BRX8 229 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 DNAJC25Q9H1X3 360 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 MRPS23Q9Y3D9 190 aaKnown RBP18.86■□□□□ 0.61
SMG6-214ENST00000573827 YIPF1Q9Y548 306 aa18.86■□□□□ 0.61
SMG6-214ENST00000573827 MICAL2O94851 1124 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 IL18RAPO95256 599 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 LRG1P02750 347 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 GPC5P78333 572 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 ATL3Q6DD88 541 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 CENPPQ6IPU0 288 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 NT5DC4Q86YG4 428 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 CCDC65Q8IXS2 484 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 HS6ST3Q8IZP7 471 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 IQUBQ8NA54 791 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 GDE1Q9NZC3 331 aa18.85■□□□□ 0.61
SMG6-214ENST00000573827 EP300Q09472 2414 aaPredicted RBP18.85■□□□□ 0.61
SMG6-214ENST00000573827 MTMR11A4FU01 709 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 GOLGA8IPA6NC78 632 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 GOLGA8JA6NMD2 632 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 EXTL3O43909 919 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 ODC1P11926 461 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 CPB1P15086 417 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 CASP1P29466 404 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 TWF1Q12792 350 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 MTSS1LQ765P7 747 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 TMC8Q8IU68 726 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 TTC9BQ8N6N2 239 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 C1orf127Q8N9H9 656 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 ATAD1Q8NBU5 361 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 PGLYRP2Q96PD5 576 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 CORO1BQ9BR76 489 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 PLA2G2FQ9BZM2 168 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 TMEM206Q9H813 350 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 FBXL21Q9UKT6 434 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 COL4A3Q01955 1670 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 CACNA1IQ9P0X4 2223 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 SPTBN4Q9H254 2564 aa18.84■□□□□ 0.61
SMG6-214ENST00000573827 GPR179Q6PRD1 2367 aa18.83■□□□□ 0.61
SMG6-214ENST00000573827 PTPRJQ12913 1337 aa18.83■□□□□ 0.61
SMG6-214ENST00000573827 POLR2DO15514 142 aaKnown RBP18.83■□□□□ 0.6
SMG6-214ENST00000573827 TGFB1I1O43294 461 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 TAF6P49848 677 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 DUSP4Q13115 394 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 USP37Q86T82 979 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 FLCNQ8NFG4 579 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 ZNF507Q8TCN5 953 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 MCRS1Q96EZ8 462 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 ZSWIM3Q96MP5 696 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 KXD1Q9BQD3 176 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 LRRC27Q9C0I9 530 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 ZCWPW1Q9H0M4 648 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 PCIF1Q9H4Z3 704 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 MAGEF1Q9HAY2 307 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 ARHGEF3Q9NR81 526 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 RBAKQ9NYW8 714 aaPredicted RBP18.83■□□□□ 0.6
SMG6-214ENST00000573827 SIX4Q9UIU6 781 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 CA14Q9ULX7 337 aa18.83■□□□□ 0.6
SMG6-214ENST00000573827 SHISA7A6NL88 538 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 CYB561D2O14569 222 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 EIF3DO15371 548 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMG6-214ENST00000573827 ECI2O75521 394 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 ASIC1P78348 528 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 WSCD1Q658N2 575 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 TANGO2Q6ICL3 276 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 PHLDB3Q6NSJ2 640 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 UNC13DQ70J99 1090 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 ALYREFQ86V81 257 aaKnown RBP18.82■□□□□ 0.6
SMG6-214ENST00000573827 LRRTM3Q86VH5 581 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 SYCP3Q8IZU3 236 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 SCFD1Q8WVM8 642 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 DDX23Q9BUQ8 820 aaKnown RBP18.82■□□□□ 0.6
SMG6-214ENST00000573827 MFSD1Q9H3U5 465 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 TBC1D17Q9HA65 648 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 PDE11AQ9HCR9 933 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 DLGAP2Q9P1A6 1054 aa18.82■□□□□ 0.6
SMG6-214ENST00000573827 NCANO14594 1321 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 KPNA7A9QM74 516 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 LDHAP00338 332 aaKnown RBP18.81■□□□□ 0.6
SMG6-214ENST00000573827 HSP90AA1P07900 732 aaKnown RBP18.81■□□□□ 0.6
SMG6-214ENST00000573827 ME1P48163 572 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 MRE11P49959 708 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 FAM78AQ5JUQ0 283 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 FAM26FQ5R3K3 315 aa18.81■□□□□ 0.6
SMG6-214ENST00000573827 CBWD2Q8IUF1 395 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms