RNA–Protein interactions for RNA: ENST00000572585.5

ABR-218, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 3,776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-218ENST00000572585 HOMEZQ8IX15 550 aa12.35□□□□□ -0.43
ABR-218ENST00000572585 FAM178BQ8IXR5 827 aa12.35□□□□□ -0.43
ABR-218ENST00000572585 ULK2Q8IYT8 1036 aa12.35□□□□□ -0.43
ABR-218ENST00000572585 CD101Q93033 1021 aa12.35□□□□□ -0.43
ABR-218ENST00000572585 SYT11Q9BT88 431 aa12.35□□□□□ -0.43
ABR-218ENST00000572585 C10orf71Q711Q0 1435 aa12.35□□□□□ -0.43
ABR-218ENST00000572585 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.43
ABR-218ENST00000572585 CDK8P49336 464 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 ARL4CP56559 192 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 PRR16Q569H4 304 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 MDH1BQ5I0G3 518 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 GRAMD4Q6IC98 578 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 CATSPER3Q86XQ3 398 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 PALM2Q8IXS6 379 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
ABR-218ENST00000572585 CYLDQ9NQC7 956 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 WDR37Q9Y2I8 494 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 RSPH10B2B2RC85 870 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 PDE5AO76074 875 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 RSPH10BP0C881 870 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 VCLP18206 1134 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
ABR-218ENST00000572585 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 RMI1Q9H9A7 625 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 ZNF652Q9Y2D9 606 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
ABR-218ENST00000572585 IPO5O00410 1097 aaKnown RBP12.34□□□□□ -0.43
ABR-218ENST00000572585 TGDSO95455 350 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 GALK1P51570 392 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 BFSP1Q12934 665 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 TMCO4Q5TGY1 634 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 SLC25A41Q8N5S1 370 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 FAM81BQ96LP2 452 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 PARVGQ9HBI0 331 aa12.34□□□□□ -0.43
ABR-218ENST00000572585 A0A0J9YVX5 310 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 CAMTA2O94983 1202 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 CYP1A2P05177 515 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 RALAP11233 206 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 RPA1P27694 616 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 NMT1P30419 496 aaKnown RBP12.33□□□□□ -0.43
ABR-218ENST00000572585 MFAP3P55082 362 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 INHBCP55103 352 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 GPS1Q13098 491 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 MPP3Q13368 585 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 TBCCQ15814 346 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 PLEKHG4Q58EX7 1191 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 EFHC1Q5JVL4 640 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 RAB3IL1Q8TBN0 382 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.43
ABR-218ENST00000572585 FAM118BQ9BPY3 351 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 GRID1Q9ULK0 1009 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 BCORQ6W2J9 1755 aa12.33□□□□□ -0.43
ABR-218ENST00000572585 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABR-218ENST00000572585 SGPL1O95470 568 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 YY1P25490 414 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 ANKRD20A4Q4UJ75 823 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 RABGAP1LQ5R372 815 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 ATG16L1Q676U5 607 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 ANKS1BQ7Z6G8 1248 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 PRPF39Q86UA1 669 aaKnown RBP12.33□□□□□ -0.44
ABR-218ENST00000572585 CCDC24Q8N4L8 307 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 RBM15BQ8NDT2 890 aaKnown RBP12.33□□□□□ -0.44
ABR-218ENST00000572585 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 KLF6Q99612 283 aaPredicted RBP12.33□□□□□ -0.44
ABR-218ENST00000572585 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
ABR-218ENST00000572585 IQANK1A0A1B0GTG1 560 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 TYROBPO43914 113 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 IFNB1P01574 187 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 HOXD13P35453 343 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 ARSEP51690 589 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 KCNA1Q09470 495 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 FBXO33Q7Z6M2 555 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 PPP1R14CQ8TAE6 165 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.33□□□□□ -0.44
ABR-218ENST00000572585 SKA1Q96BD8 255 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 EPB41L1Q9H4G0 881 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.33□□□□□ -0.44
ABR-218ENST00000572585 EMSYQ7Z589 1322 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 PLCH1Q4KWH8 1693 aa12.33□□□□□ -0.44
ABR-218ENST00000572585 CYP26A1O43174 497 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 PSMC6P62333 389 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 PPIDQ08752 370 aaKnown RBP12.32□□□□□ -0.44
ABR-218ENST00000572585 KRT81Q14533 505 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 RASA3Q14644 834 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 PDSS2Q86YH6 399 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 CPNE8Q86YQ8 564 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 LRRC47Q8N1G4 583 aaKnown RBP12.32□□□□□ -0.44
ABR-218ENST00000572585 DDI1Q8WTU0 396 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
ABR-218ENST00000572585 NMUR2Q9GZQ4 415 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 S100A14Q9HCY8 104 aa12.32□□□□□ -0.44
ABR-218ENST00000572585 OLFML3Q9NRN5 406 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms