RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 C1orf127Q8N9H9 656 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 OR10T2Q8NGX3 314 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 RPP25Q9BUL9 199 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 MTMR12Q9C0I1 747 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 AGPAT3Q9NRZ7 376 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 FBXL21Q9UKT6 434 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 DUSP12Q9UNI6 340 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 CITO14578 2027 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 NCOR1O75376 2440 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 PVALEFA0A1B0GWK0 134 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 ZNF233A6NK53 670 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 KPNA7A9QM74 516 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 VNN2O95498 520 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 TMEM191BP0C7N4 346 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 PTPN2P17706 415 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 NDUFA8P51970 172 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 BFSP1Q12934 665 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 DUSP4Q13115 394 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 SV2CQ496J9 727 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 WSCD1Q658N2 575 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 PARM1Q6UWI2 310 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 METTL23Q86XA0 190 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 HS6ST3Q8IZP7 471 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 CSGALNACT2Q8N6G5 542 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 CACTINQ8WUQ7 758 aaKnown RBP19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 MCRS1Q96EZ8 462 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 ZNF560Q96MR9 790 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 CRISPLD1Q9H336 500 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 MFSD1Q9H3U5 465 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 EXOC1Q9NV70 894 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 HPSEQ9Y251 543 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 SLC27A5Q9Y2P5 690 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 YIPF1Q9Y548 306 aa19.19■□□□□ 0.66
CTDNEP1-207ENST00000572043 KIAA0391O15091 583 aaKnown RBP19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 KLRC4O43908 158 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 SOAT2O75908 522 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 CEBPBP17676 345 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 PAX3P23760 479 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 SYKP43405 635 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 GPR17Q13304 367 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 HTR4Q13639 388 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 KMT5BQ4FZB7 885 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 IER5LQ5T953 404 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 NPAS3Q8IXF0 933 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 ELMOD1Q8N336 334 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 TTC9BQ8N6N2 239 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 FSIP1Q8NA03 581 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 ATAD1Q8NBU5 361 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 FGF14Q92915 247 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 TCEAL4Q96EI5 215 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 BORCS6Q96GS4 357 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 OXCT2Q9BYC2 517 aaPredicted RBP19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 SCAND2PQ9GZW5 306 aaPredicted RBP19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 CEP72Q9P209 647 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 DSEQ9UL01 958 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 UBE4BO95155 1302 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 PTPRJQ12913 1337 aa19.18■□□□□ 0.66
CTDNEP1-207ENST00000572043 MTMR11A4FU01 709 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 ANHXE9PGG2 379 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 CYP11A1P05108 521 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 PRR29P0C7W0 189 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 MYL4P12829 197 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 MYBPC2Q14324 1141 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 SLC39A12Q504Y0 691 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 IQCEQ6IPM2 695 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 PDZD4Q76G19 769 aaPredicted RBP19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 HS2ST1Q7LGA3 356 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 SIX5Q8N196 739 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 THEM5Q8N1Q8 247 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 FLCNQ8NFG4 579 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 OR5B17Q8NGF7 314 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 FAM122AQ96E09 287 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 ANKRD36BP1Q96IX9 119 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 ZNF512Q96ME7 567 aaPredicted RBP19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 RTP3Q9BQQ7 232 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 GOLPH3LQ9H4A5 285 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 CA14Q9ULX7 337 aa19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 PDCD11Q14690 1871 aaKnown RBP19.17■□□□□ 0.66
CTDNEP1-207ENST00000572043 NRG2O14511 850 aaPredicted RBP19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 DLATP10515 647 aaKnown RBP19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 GJA1P17302 382 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 PNPLA4P41247 253 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 CCR2P41597 374 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 RBP5P82980 135 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 STK4Q13043 487 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 SNRNP35Q16560 246 aaKnown RBP19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 KNOP1Q1ED39 458 aaKnown RBP19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 CYP4A22Q5TCH4 519 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 CENPPQ6IPU0 288 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 KIAA0895Q8NCT3 520 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 NXPE3Q969Y0 559 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 CCDC127Q96BQ5 260 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 SEPT5Q99719 369 aaPredicted RBP19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 KXD1Q9BQD3 176 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 INTS13Q9NVM9 706 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 USP25Q9UHP3 1055 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 SIX4Q9UIU6 781 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 ITGA11Q9UKX5 1188 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 MAFFQ9ULX9 164 aa19.16■□□□□ 0.66
CTDNEP1-207ENST00000572043 ZFP37Q9Y6Q3 630 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms