RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 YWHAHQ04917 246 aaPredicted RBP20.9■□□□□ 0.94
NUP88-203ENST00000572019 TNK2Q07912 1038 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 PDIA5Q14554 519 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 ZBTB6Q15916 424 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 PKN3Q6P5Z2 889 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 NETO1Q8TDF5 533 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 DRC1Q96MC2 740 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 NTPCRQ9BSD7 190 aaKnown RBP20.9■□□□□ 0.94
NUP88-203ENST00000572019 DNM3Q9UQ16 869 aa20.9■□□□□ 0.94
NUP88-203ENST00000572019 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
NUP88-203ENST00000572019 TCHHQ07283 1943 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 TTC26A0AVF1 554 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 CHADO15335 359 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 TOM1L1O75674 476 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 PRAMEF12O95522 483 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 MAPTP10636 758 aaKnown RBP20.89■□□□□ 0.93
NUP88-203ENST00000572019 LRPAP1P30533 357 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 KPNA1P52294 538 aaPredicted RBP20.89■□□□□ 0.93
NUP88-203ENST00000572019 CACNB1Q02641 598 aaPredicted RBP20.89■□□□□ 0.93
NUP88-203ENST00000572019 PON2Q15165 354 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 CCDC6Q16204 474 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 FAM160A2Q8N612 972 aaPredicted RBP20.89■□□□□ 0.93
NUP88-203ENST00000572019 LEMD2Q8NC56 503 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 CSGALNACT1Q8TDX6 532 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 PNMA5Q96PV4 448 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 PLIN2Q99541 437 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 RXFP3Q9NSD7 469 aa20.89■□□□□ 0.93
NUP88-203ENST00000572019 CFAP47Q6ZTR5 3102 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 MYBPHLA2RUH7 354 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 MTMR11A4FU01 709 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 MARCKSP29966 332 aaPredicted RBP20.88■□□□□ 0.93
NUP88-203ENST00000572019 TRAPPC10P48553 1259 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 MCL1Q07820 350 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 PPP2R5DQ14738 602 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 ZRSR1Q15695 479 aaKnown RBP20.88■□□□□ 0.93
NUP88-203ENST00000572019 CSRP2Q16527 193 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 CENPPQ6IPU0 288 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 KIF12Q96FN5 646 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 SMG9Q9H0W8 520 aaKnown RBP20.88■□□□□ 0.93
NUP88-203ENST00000572019 POLR3BQ9NW08 1133 aaPredicted RBP20.88■□□□□ 0.93
NUP88-203ENST00000572019 MAFFQ9ULX9 164 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 MYO16Q9Y6X6 1858 aa20.88■□□□□ 0.93
NUP88-203ENST00000572019 LACTBL1A8MY62 500 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 FAM189A1O60320 539 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 PAPSS2O95340 614 aaPredicted RBP20.87■□□□□ 0.93
NUP88-203ENST00000572019 GUCY2CP25092 1073 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 MLLT6P55198 1093 aaPredicted RBP20.87■□□□□ 0.93
NUP88-203ENST00000572019 GPR17Q13304 367 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 CCINQ13939 588 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.87■□□□□ 0.93
NUP88-203ENST00000572019 DNAJB7Q7Z6W7 309 aaPredicted RBP20.87■□□□□ 0.93
NUP88-203ENST00000572019 LONP2Q86WA8 852 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 YAF2Q8IY57 180 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 OR10T2Q8NGX3 314 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 SPIRE2Q8WWL2 714 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 CHFRQ96EP1 664 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 LPIN3Q9BQK8 851 aa20.87■□□□□ 0.93
NUP88-203ENST00000572019 DAXXQ9UER7 740 aaPredicted RBP20.87■□□□□ 0.93
NUP88-203ENST00000572019 EXTL3O43909 919 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 LRP3O75074 770 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 PLS3P13797 630 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 U2AF2P26368 475 aaKnown RBP eCLIP20.86■□□□□ 0.93
NUP88-203ENST00000572019 PXNP49023 591 aaPredicted RBP20.86■□□□□ 0.93
NUP88-203ENST00000572019 EPHB3P54753 998 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 CYP4F8P98187 520 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 STRN3Q13033 797 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 SF3A2Q15428 464 aaKnown RBP20.86■□□□□ 0.93
NUP88-203ENST00000572019 ENOX2Q16206 610 aaKnown RBP20.86■□□□□ 0.93
NUP88-203ENST00000572019 ST3GAL2Q16842 350 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 GPR158Q5T848 1215 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 KRT79Q5XKE5 535 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 LRRC15Q8TF66 581 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 GPR88Q9GZN0 384 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 C17orf75Q9HAS0 396 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 NOL7Q9UMY1 257 aaKnown RBP20.86■□□□□ 0.93
NUP88-203ENST00000572019 LIMCH1Q9UPQ0 1083 aa20.86■□□□□ 0.93
NUP88-203ENST00000572019 CLDN3O15551 220 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 KCNA4P22459 653 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 GABRR2P28476 465 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 SLC12A3P55017 1021 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 GNL2Q13823 731 aaKnown RBP20.85■□□□□ 0.93
NUP88-203ENST00000572019 LRRC32Q14392 662 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 OVOS1Q6IE37 1185 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 ZPBP2Q6X784 338 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 DSTYKQ6XUX3 929 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 PSMG2Q969U7 264 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 LLPHQ9BRT6 129 aaKnown RBP20.85■□□□□ 0.93
NUP88-203ENST00000572019 ATXN3LQ9H3M9 355 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 C8orf33Q9H7E9 229 aaPredicted RBP20.85■□□□□ 0.93
NUP88-203ENST00000572019 IL21Q9HBE4 155 aa20.85■□□□□ 0.93
NUP88-203ENST00000572019 KIAA1549LQ6ZVL6 1849 aa20.84■□□□□ 0.93
NUP88-203ENST00000572019 OTOL1A6NHN0 477 aaPredicted RBP20.84■□□□□ 0.93
NUP88-203ENST00000572019 CLTAP09496 248 aa20.84■□□□□ 0.93
NUP88-203ENST00000572019 ATF6P18850 670 aa20.84■□□□□ 0.93
NUP88-203ENST00000572019 MATR3P43243 847 aaKnown RBP eCLIP20.84■□□□□ 0.93
NUP88-203ENST00000572019 ARSHQ5FYA8 562 aa20.84■□□□□ 0.93
NUP88-203ENST00000572019 USP37Q86T82 979 aa20.84■□□□□ 0.93
NUP88-203ENST00000572019 RALGPS2Q86X27 583 aaPredicted RBP20.84■□□□□ 0.93
NUP88-203ENST00000572019 E2F7Q96AV8 911 aa20.84■□□□□ 0.93
NUP88-203ENST00000572019 PLEKHA5Q9HAU0 1116 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms