RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	ITGAM	P11215	1152 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	OSM	P13725	252 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	GSPT1	P15170	499 aa	Known RBP	4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	AGXT	P21549	392 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	SLC16A1	P53985	500 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	SEC24C	P53992	1094 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	CREM	Q03060	361 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	TP53BP2	Q13625	1128 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	UBXN2B	Q14CS0	331 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	TSHZ3	Q63HK5	1081 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	EGFLAM	Q63HQ2	1017 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	DPY19L2P1	Q6NXN4	242 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	ZNF529	Q6P280	563 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	OLFML1	Q6UWY5	402 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	TMEM132C	Q8N3T6	1108 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	MED15	Q96RN5	788 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	NEU1	Q99519	415 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	TEX101	Q9BY14	249 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	ALOXE3	Q9BYJ1	711 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	GALNT9	Q9HCQ5	603 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	TMEM74B	Q9NUR3	256 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	TBCCD1	Q9NVR7	557 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	DNM3	Q9UQ16	869 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	INSL6	Q9Y581	213 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	PCDHGA2	Q9Y5H1	932 aa		4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	NKTR	P30414	1462 aa	Known RBP	4.54	□□□□□ -1.68
CDC27-213	ENST00000571643	SETBP1	Q9Y6X0	1596 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	PNPLA7	Q6ZV29	1317 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	TPD52L2	O43399	206 aa	Known RBP	4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	ESRRB	O95718	433 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	GPANK1	O95872	356 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	TYRP1	P17643	537 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	WAS	P42768	502 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	PTTG1IP	P53801	180 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	OCA2	Q04671	838 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	MTM1	Q13496	603 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	HSP90AB4P	Q58FF6	505 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	RNF187	Q5TA31	235 aa	Predicted RBP	4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	CCDC181	Q5TID7	509 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	LHFPL2	Q6ZUX7	228 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	COLGALT2	Q8IYK4	626 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	FITM2	Q8N6M3	262 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	FBXO18	Q8NFZ0	1043 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	NUP133	Q8WUM0	1156 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	ASB10	Q8WXI3	467 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	PNKP	Q96T60	521 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	SPC25	Q9HBM1	224 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	METTL14	Q9HCE5	456 aa	Known RBP	4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	DMTF1	Q9Y222	760 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	MAP3K2	Q9Y2U5	619 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	SPATA31E1	Q6ZUB1	1445 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	PRAG1	Q86YV5	1406 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	CLTCL1	P53675	1640 aa		4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	CHD2	O14647	1828 aa	Known RBP	4.53	□□□□□ -1.68
CDC27-213	ENST00000571643	MAST3	O60307	1309 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	MYADML2	A6NDP7	307 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	TOM1	O60784	492 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	CKB	P12277	381 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	FGFR4	P22455	802 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	CXCR5	P32302	372 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	CXADR	P78310	365 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	DACT2	Q5SW24	774 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	SYCE2	Q6PIF2	218 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	ADGRG3	Q86Y34	549 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	GPR150	Q8NGU9	434 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	CAGE1	Q8TC20	777 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	CCHCR1	Q8TD31	782 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	COG1	Q8WTW3	980 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	RNF31	Q96EP0	1072 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	LDAH	Q9H6V9	325 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	SLC5A4	Q9NY91	659 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	PTGFRN	Q9P2B2	879 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	SIK3	Q9Y2K2	1263 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	MTO1	Q9Y2Z2	717 aa	Known RBP	4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	NEU2	Q9Y3R4	380 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	ACTL7A	Q9Y615	435 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	PPL	O60437	1756 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	NWD1	Q149M9	1564 aa		4.52	□□□□□ -1.69
CDC27-213	ENST00000571643	NEXMIF	Q5QGS0	1516 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	LAMC1	P11047	1609 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	SGTA	O43765	313 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	ERN1	O75460	977 aa	Known RBP	4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	HAUS5	O94927	633 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	RPLP2	P05387	115 aa	Known RBP	4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	ELANE	P08246	267 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	DDC	P20711	480 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	PTMS	P20962	102 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	FPR1	P21462	350 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	CD38	P28907	300 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	PCSK1	P29120	753 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	SLC6A9	P48067	706 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	KRT85	P78386	507 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	SEPT2	Q15019	361 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	CLUL1	Q15846	466 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	PRR16	Q569H4	304 aa		4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.51	□□□□□ -1.69
CDC27-213	ENST00000571643	PPP4R3A	Q6IN85	833 aa		4.51	□□□□□ -1.69

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