RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 SOBPA7XYQ1 873 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 OAZ2O95190 189 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 MCF2P10911 925 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 CEACAM1P13688 526 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
CHMP6-202ENST00000571457 WEE1P30291 646 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 MCM2P49736 904 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 OSTNP61366 133 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 CREB5Q02930 508 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 DUSP4Q13115 394 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 GPR158Q5T848 1215 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 ITIH5Q86UX2 942 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 CEP120Q8N960 986 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 EXOC4Q96A65 974 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 ACO2Q99798 780 aaKnown RBP12.38□□□□□ -0.43
CHMP6-202ENST00000571457 LARP6Q9BRS8 491 aaKnown RBP12.38□□□□□ -0.43
CHMP6-202ENST00000571457 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 MRPL4Q9BYD3 311 aaKnown RBP12.38□□□□□ -0.43
CHMP6-202ENST00000571457 CDT1Q9H211 546 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 ATXN3LQ9H3M9 355 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 SMOC1Q9H4F8 434 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
CHMP6-202ENST00000571457 CITO14578 2027 aa12.38□□□□□ -0.43
CHMP6-202ENST00000571457 IGSF10Q6WRI0 2623 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 BCLAF3A2AJT9 711 aaKnown RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 OR6C75A6NL08 312 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 MED24O75448 989 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 CAVIN2O95810 425 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 CSRP1P21291 193 aaKnown RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 MUTP22033 750 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 RPA1P27694 616 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 HOXC13P31276 330 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 IRX6P78412 446 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 TNK2Q07912 1038 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 SCRN1Q12765 414 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 GPR17Q13304 367 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 TMEM196Q5HYL7 178 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 STXBP5Q5T5C0 1151 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 TCEAL6Q6IPX3 200 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 DNAJB7Q7Z6W7 309 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 USP37Q86T82 979 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 GPIHBP1Q8IV16 184 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 TCEAL3Q969E4 200 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 PSMG2Q969U7 264 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 C18orf25Q96B23 403 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 LRRC3BQ96PB8 259 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 GCNAQ96QF7 691 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 DNAJC25Q9H1X3 360 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 PTPRHQ9HD43 1115 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 PDRG1Q9NUG6 133 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-202ENST00000571457 ZMYM5Q9UJ78 669 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 ATG2BQ96BY7 2078 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 CACNA1EQ15878 2313 aa12.37□□□□□ -0.43
CHMP6-202ENST00000571457 NUP210Q8TEM1 1887 aaPredicted RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 SRRM3A6NNA2 597 aaPredicted RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 M0QZQ0 153 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 TRDMT1O14717 391 aaKnown RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 GIPC1O14908 333 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 GABRR2P28476 465 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 CDC25CP30307 473 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 FBXO43Q4G163 708 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 HAUS3Q68CZ6 603 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 PKN3Q6P5Z2 889 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 MPZL3Q6UWV2 235 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 ZCCHC14Q8WYQ9 949 aaKnown RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 PGLYRP2Q96PD5 576 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 MKNK1Q9BUB5 465 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 TMEM121BQ9BXQ6 578 aaPredicted RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 TMEM134Q9H6X4 195 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 TMEM9BQ9NQ34 198 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 HSFX1Q9UBD0 423 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 WASF3Q9UPY6 502 aa12.36□□□□□ -0.43
CHMP6-202ENST00000571457 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
CHMP6-202ENST00000571457 CCDC169A6NNP5 214 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 KHNYNO15037 678 aaKnown RBP12.35□□□□□ -0.43
CHMP6-202ENST00000571457 RNF40O75150 1001 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 VNN2O95498 520 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 PRAMEF12O95522 483 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 DRD1P21728 446 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 PROZP22891 400 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 DMP1Q13316 513 aaPredicted RBP12.35□□□□□ -0.43
CHMP6-202ENST00000571457 MYBPC2Q14324 1141 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 VEPH1Q14D04 833 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 FSTL4Q6MZW2 842 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 ARMCX5Q6P1M9 558 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 GATA6Q92908 595 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 SCNM1Q9BWG6 230 aa12.35□□□□□ -0.43
CHMP6-202ENST00000571457 GKN1Q9NS71 199 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms