RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 GPR17Q13304 367 aa32.79■■■□□ 2.84
CTDNEP1-206ENST00000571409 CWF19L1Q69YN2 538 aaKnown RBP32.79■■■□□ 2.84
CTDNEP1-206ENST00000571409 RCOR1Q9UKL0 485 aa32.79■■■□□ 2.84
CTDNEP1-206ENST00000571409 VNN2O95498 520 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 TCF15Q12870 199 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 MYBPC2Q14324 1141 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 IQCEQ6IPM2 695 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 GPR152Q8TDT2 470 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 MCRS1Q96EZ8 462 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 ZNF512Q96ME7 567 aaPredicted RBP32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 PYM1Q9BRP8 204 aaKnown RBP32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 DSEQ9UL01 958 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 CA14Q9ULX7 337 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 YIPF1Q9Y548 306 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 TCHHQ07283 1943 aa32.78■■■□□ 2.84
CTDNEP1-206ENST00000571409 CYB561D2O14569 222 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 CYP11A1P05108 521 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 NPR3P17342 541 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 CEBPBP17676 345 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 CASP1P29466 404 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 CLCN5P51795 746 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 PRSS36Q5K4E3 855 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 FAM26FQ5R3K3 315 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 GPD1LQ8N335 351 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 TMEM209Q96SK2 561 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 BLZF1Q9H2G9 400 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 GDE1Q9NZC3 331 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 CEP72Q9P209 647 aa32.77■■■□□ 2.84
CTDNEP1-206ENST00000571409 KRBA1A5PL33 1030 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 EIF3DO15371 548 aaKnown RBP eCLIP32.76■■■□□ 2.833e-16■□□□□ 8.3
CTDNEP1-206ENST00000571409 NUBP1P53384 320 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 SV2CQ496J9 727 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 UNC13DQ70J99 1090 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 PDZD4Q76G19 769 aaPredicted RBP32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 TCEAL4Q96EI5 215 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZNF560Q96MR9 790 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 CRISPLD1Q9H336 500 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 SLC2A4RGQ9NR83 387 aa32.76■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 MTMR11A4FU01 709 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZNF197O14709 1029 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 KIAA0391O15091 583 aaKnown RBP32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 HOXD11P31277 338 aaPredicted RBP32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 HOXD13P35453 343 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 DUSP4Q13115 394 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 EPM2AIP1Q7L775 607 aaPredicted RBP32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 METTL23Q86XA0 190 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 HS6ST3Q8IZP7 471 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 OR10T2Q8NGX3 314 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 CACTINQ8WUQ7 758 aaKnown RBP32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 KXD1Q9BQD3 176 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 PDE11AQ9HCR9 933 aa32.75■■■□□ 2.83
CTDNEP1-206ENST00000571409 KPNA7A9QM74 516 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 ITGB3P05106 788 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 POLR2BP30876 1174 aaKnown RBP32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 CCR2P41597 374 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 AFMP43652 599 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 CYP4A22Q5TCH4 519 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 POTEHQ6S545 545 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 C1orf127Q8N9H9 656 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZNF507Q8TCN5 953 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 BORCS6Q96GS4 357 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZDHHC9Q9Y397 364 aa32.74■■■□□ 2.83
CTDNEP1-206ENST00000571409 AOC1P19801 751 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 PNPLA4P41247 253 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 GPC5P78333 572 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 PLD1Q13393 1074 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 WSCD1Q658N2 575 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 CENPPQ6IPU0 288 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 ATAD1Q8NBU5 361 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 ASAH2Q9NR71 780 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 AGAP1Q9UPQ3 857 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 SLC27A5Q9Y2P5 690 aa32.73■■■□□ 2.83
CTDNEP1-206ENST00000571409 STK25O00506 426 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 GALR2O43603 387 aaPredicted RBP32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 PI15O43692 258 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 MYL4P12829 197 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 EHHADHQ08426 723 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 CUL4BQ13620 913 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 CEP57L1Q8IYX8 460 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 THEM5Q8N1Q8 247 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 FAM84AQ96KN4 292 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 RTP3Q9BQQ7 232 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 ARHGEF3Q9NR81 526 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 HSPBP1Q9NZL4 362 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 SERTAD1Q9UHV2 236 aa32.72■■■□□ 2.83
CTDNEP1-206ENST00000571409 NRG2O14511 850 aaPredicted RBP32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 MICAL2O94851 1124 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 TMEM191BP0C7N4 346 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 RFX1P22670 979 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 ALDH1A3P47895 512 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 GRAMD1CQ8IYS0 662 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 TTC9BQ8N6N2 239 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 LEMD2Q8NC56 503 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 CHAMP1Q96JM3 812 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZCWPW1Q9H0M4 648 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 ITGA11Q9UKX5 1188 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 UBE4BO95155 1302 aa32.71■■■□□ 2.83
CTDNEP1-206ENST00000571409 ZNF233A6NK53 670 aa32.7■■■□□ 2.83
CTDNEP1-206ENST00000571409 EPHB3P54753 998 aa32.7■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms