RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TNFAIP3P21580 790 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 OR1G1P47890 313 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 AFF1P51825 1210 aaKnown RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 CCZ1BP86790 482 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 CCZ1P86791 482 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 STILQ15468 1287 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 SPA17Q15506 151 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 TDRD12Q587J7 1177 aaKnown RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 TMEM240Q5SV17 173 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 HGSNATQ68CP4 663 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 TMEM270Q6UE05 265 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 TMEM139Q8IV31 216 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 TNIP3Q96KP6 325 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 NT5C1AQ9BXI3 368 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 OXCT2Q9BYC2 517 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 SNX25Q9H3E2 840 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 AAASQ9NRG9 546 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 ARHGAP20Q9P2F6 1191 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 AJAP1Q9UKB5 411 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 EPN1Q9Y6I3 576 aaPredicted RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 KIAA0100Q14667 2235 aaKnown RBP12.74□□□□□ -0.37
CDRT1-206ENST00000571263 TTC3P53804 2025 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 SCN5AQ14524 2016 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 LTBP2Q14767 1821 aa12.74□□□□□ -0.37
CDRT1-206ENST00000571263 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 M0QZQ0 153 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 CILPO75339 1184 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 DDHD2O94830 711 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 UPP2O95045 317 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 WEE2P0C1S8 567 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 VDRP11473 427 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 CYP11B1P15538 503 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 TYMPP19971 482 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 CLCN1P35523 988 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 ZNF132P52740 706 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 CDR2Q01850 454 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 ARID5AQ03989 594 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 GOLGA8FQ08AF8 430 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 GOLGA8DPQ0D2H9 430 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 SOWAHAQ2M3V2 549 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 TRIM72Q6ZMU5 477 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 C16orf59Q7L2K0 433 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 OTOP2Q7RTS6 562 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 ZNF280BQ86YH2 543 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 KAT5Q92993 513 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 TMEM176AQ96HP8 235 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 SENP8Q96LD8 212 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 CHP1Q99653 195 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 AGPAT1Q99943 283 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 NRDE2Q9H7Z3 1164 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 POLIQ9UNA4 740 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 INSL6Q9Y581 213 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDRT1-206ENST00000571263 SLC4A7Q9Y6M7 1214 aa12.73□□□□□ -0.37
CDRT1-206ENST00000571263 TDRD15B5MCY1 1934 aaKnown RBP12.72□□□□□ -0.37
CDRT1-206ENST00000571263 GOLGA6L9A6NEM1 432 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 NRP1O14786 923 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 PPEF2O14830 753 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 SYN3O14994 580 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 SPTLC1O15269 473 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 CYP26A1O43174 497 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 NDUFA10O95299 355 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 LCA5LO95447 670 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 CYP11A1P05108 521 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 GALTP07902 379 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 CCDC175P0C221 793 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 LAG3P18627 525 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 CD58P19256 250 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 GNA15P30679 374 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
CDRT1-206ENST00000571263 BTG3Q14201 252 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-206ENST00000571263 SLC18A3Q16572 532 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 CRYBG2Q8N1P7 616 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 SUSD3Q96L08 255 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 ZNF830Q96NB3 372 aaPredicted RBP12.72□□□□□ -0.37
CDRT1-206ENST00000571263 YME1L1Q96TA2 773 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 ARID3AQ99856 593 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 ZBED2Q9BTP6 218 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDRT1-206ENST00000571263 PDCL3Q9H2J4 239 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 KCNF1Q9H3M0 494 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 MICAL3Q7RTP6 2002 aa12.72□□□□□ -0.37
CDRT1-206ENST00000571263 ATP8B3O60423 1300 aa12.71□□□□□ -0.37
CDRT1-206ENST00000571263 TRIP11Q15643 1979 aa12.71□□□□□ -0.37
CDRT1-206ENST00000571263 SOWAHDA6NJG2 315 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms